Gene Information

Name : Mrub_2148 (Mrub_2148)
Accession : YP_003507922.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_013946
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2199818 - 2200534 bp
Length : 717 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; InterPro IPR003439:IPR003593:IPR017871; KEGG: mxa:MXAN_4199 putative macrolide efflux ABC transporter, ATP-binding protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; S

DNA sequence : 
ATGGCTGCTTCCCAGCGTGAAAAAGTGCCGGTGGTGGAGATGCGGGGCGTAACCAAGGTCTACCGCTCGGGCTCGAGCAC
CCGCACGGTGGAGGTGCGCGCACTTTCGGGCGTCGACCTGACCATCTACCCCGGCGAGTATGTGGCCCTGATGGGGCCTT
CGGGCTCGGGCAAGTCTACCCTGATGCACATCATCGGCCTGCTCGACACGCCCACCGAGGGCGAGTACCGCCTGGGGGGC
GAGCCGGTGCGCGGCCTGAGCGAGGCCCAACTGGCCCGCATCCGCAACCAGCGGGTGGGGTTTGTGTTCCAGGCGTTTTT
TCTGCTACCCCGCCTGACCGCGCTGCACAACGTGGCCCTGCCCCTGGTCTACCGGGGACTGCCGCTGGCAGAGCGGCTTA
AGCGGGCCAGAGCGGCGCTCGAGGCGGTGGGTCTGGGCGACCGCCTCGACCACCTGCCCTCCGAGCTTTCAGGGGGGCAG
AAGCAGCGGGTGGCCATCGCGCGGGCCCTGGTGCAGGAGCCCGACCTGTTGCTGGCCGATGAGCCCACCGGCAACCTCGA
CTCCAGGTCTTCCGACGAGATTCTGGGGCTGTTCGATGCCCTGCACCGCCAGGGCAAGACCATCGTGATGGTGACCCACG
AGCCGGATGTGGGGGCCCGGGCCCAGCGCATCGTGCGGCTGCGCGATGGCCGGGTGGCCGAAGGAGGGGTGGCATGA

Protein sequence : 
MAASQREKVPVVEMRGVTKVYRSGSSTRTVEVRALSGVDLTIYPGEYVALMGPSGSGKSTLMHIIGLLDTPTEGEYRLGG
EPVRGLSEAQLARIRNQRVGFVFQAFFLLPRLTALHNVALPLVYRGLPLAERLKRARAALEAVGLGDRLDHLPSELSGGQ
KQRVAIARALVQEPDLLLADEPTGNLDSRSSDEILGLFDALHRQGKTIVMVTHEPDVGARAQRIVRLRDGRVAEGGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-30 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-16 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_2148 YP_003507922.1 ABC transporter NC_012469.1.7686878. Protein 4e-58 53
Mrub_2148 YP_003507922.1 ABC transporter NC_008702.1.4606598. Protein 2e-44 53
Mrub_2148 YP_003507922.1 ABC transporter CP001581.1.gene598.p Protein 3e-36 43