Gene Information

Name : Mrub_1885 (Mrub_1885)
Accession : YP_003507662.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_013946
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1944241 - 1945065 bp
Length : 825 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; InterPro IPR003439:IPR003593:IPR017871; KEGG: bbt:BBta_6033 putative ABC transporter, ATP-binding protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; SPTR: A3X8

DNA sequence : 
ATGATGCAAGCCAATACCTCTCCAGAGTCATCCGCCAAAGGTTCTAAGGCAGAGGCCATCGTGTCGGTGCAGGGTGTCTC
GATGGTGTTTCCAAACGGAACCGTGGCCCTGAAGGATGCCAACCTCGAGATCGCCCAGGGGGAGTTCATCAGCCTGATTG
GGCCCTCGGGTTGCGGTAAAACCACCCTGCTGCGCCTGCTGGCCGACCTGATCCAGCCCTCTTCGGGCACCATCCGCATC
GGGGGTAAAAGCCCCGAGCAGGCCCGCAAGGCCCGGGCCTACGGCTATGTGTTCCAGGCCCCCACCCTGATGGAGTGGCG
CAATGTGCTCTCGAACGTAATGCTGCCCTTGGAGGTGATGAACTTTCCCGTGCAGGAGCGCAGGGCCAGGGCCGAGCGGA
TGCTGGCTTTGGTGGGGCTGGAGAAGTTCGCCAGGCACTACCCCTGGCAGCTTTCGGGCGGGATGCAGCAGCGGGTCTCC
ATCGCCCGGGCCCTGGCTTTCGACCCGCAGCTTTTGTTCATGGATGAGCCCTTTGGCGCCCTGGACGAGATTACCCGCGA
GAACCTGAACCTGGAGCTTTTGCGCCTGTGGCGCGAGACCGGTAAGACCATCATCTTTGTGACCCACTCCATCCCCGAGG
CGGTCTTCCTCTCCACCCGGATCGTGGTGATGACCCCGCGCCCCGGCAAGATCGAGACGGTCATACCGGTAGACCTGCCC
CAGCCCCGCACCTTCGAGACCCGCGAGACCACGCGCTTTTTCGAGCTGGCCACCCTGGTGCGTGAGGCTTTGCGCAAAGG
CCACAGCTACGAGGTGACCGAGTGA

Protein sequence : 
MMQANTSPESSAKGSKAEAIVSVQGVSMVFPNGTVALKDANLEIAQGEFISLIGPSGCGKTTLLRLLADLIQPSSGTIRI
GGKSPEQARKARAYGYVFQAPTLMEWRNVLSNVMLPLEVMNFPVQERRARAERMLALVGLEKFARHYPWQLSGGMQQRVS
IARALAFDPQLLFMDEPFGALDEITRENLNLELLRLWRETGKTIIFVTHSIPEAVFLSTRIVVMTPRPGKIETVIPVDLP
QPRTFETRETTRFFELATLVREALRKGHSYEVTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-35 45
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_1885 YP_003507662.1 ABC transporter NC_008702.1.4606598. Protein 1e-16 41