Gene Information

Name : Mrub_1048 (Mrub_1048)
Accession : YP_003506832.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_013946
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1043103 - 1043840 bp
Length : 738 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; InterPro IPR003439:IPR003593:IPR017871; KEGG: rce:RC1_3126 general L-amino acid transport ATP-binding protein AapP; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; SPTR: A6F1A8 A

DNA sequence : 
ATGAGCGAGGTTATTATCCGGATCCGGGGCCTCAACAAATGGTTCGGTAAGCTGCAGGTGCTGCGGGAGGTGAACCTCGA
GGTCGCCGCAGGCGAAAAGGTGGTGATCGTAGGGCCCTCGGGTTCGGGCAAGTCCACCCTGATTCGCTGCATCAACCGGC
TGGAGGACTTCCAGCAGGGCGAGGTGATTGTGGACGGCATCTCCCTGAGCTCGGCCCGGAACCTCGAGGCGGTGCGGCGC
GAGGTGGGGATGGTCTTCCAGCAGTTCAACCTCTTTCCCCACATGACCGTACTAGAGAACGTGGCCCTGGCCCCGCAAAA
GGTGCGCGGCTGGCCCCGGGCCAAAGCCGAGCAGAAGGCGGTGGAGCTGCTGGAGCGGGTGGGCATCGCCGACCAGGCCC
ACAAACACCCCGGGCAGCTCTCCGGTGGGCAGCAGCAGCGGGTGGCCATCGCCCGGGCCCTGGCCATGGAGCCCAAGATC
ATGCTCTTCGACGAGCCCACCAGCGCGCTGGATCCCGAGATGGTGGGGGAGGTGCTGGACGTGATGCGCGACCTGGCCCG
GGGCGGCATGACCATGCTGGTGGTCACCCACGAGATGGGCTTCGCCAAGGAGGTGGCCGATCGGGTGGTGGTGATGGACC
AGGGACAGATCCTTGAGCAGGCCCCGCCCGAGGTGATCTTCCAGAACCCCACCCACGAGCGCACCCGCAGCTTTTTGCAG
CGGGTTCTGCACCACTAA

Protein sequence : 
MSEVIIRIRGLNKWFGKLQVLREVNLEVAAGEKVVIVGPSGSGKSTLIRCINRLEDFQQGEVIVDGISLSSARNLEAVRR
EVGMVFQQFNLFPHMTVLENVALAPQKVRGWPRAKAEQKAVELLERVGIADQAHKHPGQLSGGQQQRVAIARALAMEPKI
MLFDEPTSALDPEMVGEVLDVMRDLARGGMTMLVVTHEMGFAKEVADRVVVMDQGQILEQAPPEVIFQNPTHERTRSFLQ
RVLHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mrub_1048 YP_003506832.1 ABC transporter NC_012469.1.7686878. Protein 2e-31 43