Gene Information

Name : Dacet_0760 (Dacet_0760)
Accession : YP_003503499.1
Strain : Denitrovibrio acetiphilus DSM 12809
Genome accession: NC_013943
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 773248 - 774294 bp
Length : 1047 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: rme:Rmet_1264 integrase catalytic subunit

DNA sequence :
ATGCTGAATAAAGAGGTGTATTTCATGATTCACACATTACAGCGGCAGGGATATTCCCAGCGAGAGATTGAGCGTATGAC
AGGTATCAGCAGAAAGACAATTTCAAAGTATCTTAACCTTAGTGACTTTCCAGAGAAGAAAGCCTATCCGGTACGTTTCA
GTAAGCTTGACCCTTTCAAGGATTATCTGAACAAACGGATAACCAGCGCACTGCCATACAAGATACCGGCGACAGTCCTT
ATCAGAGAGATTAAAGAGATGGGGTATGACGGCGGAATAACTATCCTTAAAGACTATATCCAGAAAGTCAGACCCAAACC
AGTGGAAGAAGAGCTTGTACGGTTTGAGACAGCGCCAGGTCATCAGATGCAGATAGATTTCGCAACAGTCAAGAGCGGTA
ATAAAAAGCTCCATGTCTTTGTAGCCGAACTAGCTTACTGTCGCAGAAGCTATACAGAGTTCATCACCGATGAGAAAGTA
GATACCTTTGTAAACTGCCACATAAAAGCTTTCAACTACTTCGGCGGAGTGCCTAAAGAAATCCTTTACGATAACGCCAA
AGCAGTTGTTATACAGCGTGACTTCTATGGAACCGGAAGCCATAAGTTCCAGGACATGTTTTTTGATATGTGTCGCCACT
ATGGCACCATACCCCGCCTGTGCAAACCATATAGGGCAAAAACTAAAGGCAAGGTTGAGCGCTTCATAAATTATATGAAG
CACAGTTTTTATTACCCTGAGTATACGAAGCTCAGAATGAATGGCCTTATAATGGATATGGACACTGCAAACATACGGGT
AACTCACTGGAATGAAGAGATTGCCGATCAGAGAATACACGGCACTACTGGTAAGAAACCGATAGACATGTTTCAGGAAG
AGAAAGAACACCTGATGCCTCTTGCTGCTCCTTACACGGGCACATATCCGGCAAGAGCAACAACTATAGCAGAAGAGCCG
GAAATCAGCTTAGAAGTGCCTGAAATAGATGTTCAATCAAGCTCTCTTGATATGTACGACTCTCTTATTCCTACAGGTGC
TTTATGA

Protein sequence :
MLNKEVYFMIHTLQRQGYSQREIERMTGISRKTISKYLNLSDFPEKKAYPVRFSKLDPFKDYLNKRITSALPYKIPATVL
IREIKEMGYDGGITILKDYIQKVRPKPVEEELVRFETAPGHQMQIDFATVKSGNKKLHVFVAELAYCRRSYTEFITDEKV
DTFVNCHIKAFNYFGGVPKEILYDNAKAVVIQRDFYGTGSHKFQDMFFDMCRHYGTIPRLCKPYRAKTKGKVERFINYMK
HSFYYPEYTKLRMNGLIMDMDTANIRVTHWNEEIADQRIHGTTGKKPIDMFQEEKEHLMPLAAPYTGTYPARATTIAEEP
EISLEVPEIDVQSSSLDMYDSLIPTGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAA21403.1 - Not tested HPI Protein 2e-67 47
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 4e-67 47
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 2e-67 47
api83 CAF28557.1 transposase Not tested YAPI Protein 2e-67 47
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 2e-67 47
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 2e-67 47
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 2e-67 47
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 2e-67 47
y2411 NP_669718.1 transposase Not tested HPI Protein 2e-67 47
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-67 47
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 2e-67 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacet_0760 YP_003503499.1 integrase catalytic subunit VFG1461 Protein 2e-67 47
Dacet_0760 YP_003503499.1 integrase catalytic subunit VFG1514 Protein 9e-68 47
Dacet_0760 YP_003503499.1 integrase catalytic subunit VFG1626 Protein 9e-68 47
Dacet_0760 YP_003503499.1 integrase catalytic subunit VFG1607 Protein 9e-68 47