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Name : Dacet_0337 (Dacet_0337) Accession : YP_003503093.1 Strain : Denitrovibrio acetiphilus DSM 12809 Genome accession: NC_013943 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 350527 - 352197 bp Length : 1671 bp Strand : - Note : KEGG: nis:NIS_1563 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase DNA sequence : ATGGCTGAAATGACCGTAGGCGAGCTCCTTAAAGAATCCGGATGTGTAACAGAAGAGCAGATCAGAATTGCTCTCGAAAT AAAAAAAATAAACAAGAAGATGCTCGGAGAAATACTGGTCGATCTCTCCTTTGTTTCCCCCAGAGAAGTTGCCATTGTCA TAGCCAGACAGGCAGACAAACCATTCATCGATATCAGCGAACACCCGCCGAGTGCGGATGCTCTCAGGCTCATAGACAGG CATACAGCAAAGCAGCTCGAAGCAATACCTATAGAAAACACTGAAAAGAGACTGACAGTGGCACTGGCTGACCCGTTCAA CATAAACACCATAGACATACTCCGCAGAAAAACCAATAAACAGATTAATGTCTATGTAGCAGACAGGGAATCTATACTCA AAAATATAGAAACTAATTATCACATGCTTGAATGTCCGATTGACAAAGAAATTCAAAAGCTTATAGACAGTGCCGTCGCA TCAGGCATAACATCTGAACCGCCTCTGCTGGTGGAGCATATTTTAAACAGTGCCATTATCGAAAGAGCCACAGATATACA CATTTCACCTGAAACCTCTGCCACGCATATATTCTTTCGCATAGACGGCATCCTGCACCACTACTACGCCTTCCCCCATA TGGTACACAGTGCACTATCTTCACGCATTAAAATATTGTCAAACCTGGACATTGCCGAACAAAGACTCCCGCAAGACGGA GCGATGAGCCACTCCTTTTTTGATGAGGATTTCGATGTCCGGGTATCAACAATACCAACCTGTTGCGGAGAAGGAATTGT TCTCAGAGTGCTTTCGAAAAACATCTCGCTGTTTAATCTGGAAAGCCTAGGGTTCGAACCGGACACCAGAGATAAACTAG AAAAGCAGCTTAAGCGTCCACACGGTATTCTGCTTGTCACAGGTCCTACGGGGTCAGGCAAAACAACAACTCTGTATGCC TCCCTGCGTAAAATTAACTCTTTGCAGCGAAAGATACTAACCGCAGAAGACCCCATCGAATACAAGTTTCCGTTCATTAA ACAAACTCAGCTTAATCTGAAAGCCGGATATACTTTTCCACGGGCAATGAGGGCTTTCCTGCGTCAGGATCCGGATGTTA TTCTTCTGGGTGAGATGCGTGACGAGGAAACAGCAGAAATGGCCATGAGAGCGTCGATAACAGGTCATCTCGTTCTCTCA ACACTCCACACCAACGACGCTGTAACTGCTATTCCCAGACTGATGGAAATGAAAATCAAAGATTATATGATAGCTTCAGG CGTTGGAGGGATTTTGTCCCAGAGACTGATCAGAAAAACTTGCTGTTCATGTCAGGAAGAAACATCCGAAAGCGTAGCAG AGCTTATCAGCAAAGGGATACCAGAGGAGGTATTTACAAAGCACGGCTACTCTCCTGACGGAGAAATAATTTACAAGCAG GGAAAGGGATGCGCTTTTTGCAGAAATACAGGCTACGCCGGAAGAGGTGTAATAAGTGAACTGCTTGTTATAGACCAGGA AATCGGCGAATTAATCGTCACCGGAGCAACACCTATGACAATCTTCAGAAAAGCAGTGACTAACGGTATGATACCTATAA TTGAATCGGGACTCATTAAAGTTATGCACGGCATCACAACCCCCGACGAAATACTTCGGGTAGCGCTCTAG Protein sequence : MAEMTVGELLKESGCVTEEQIRIALEIKKINKKMLGEILVDLSFVSPREVAIVIARQADKPFIDISEHPPSADALRLIDR HTAKQLEAIPIENTEKRLTVALADPFNINTIDILRRKTNKQINVYVADRESILKNIETNYHMLECPIDKEIQKLIDSAVA SGITSEPPLLVEHILNSAIIERATDIHISPETSATHIFFRIDGILHHYYAFPHMVHSALSSRIKILSNLDIAEQRLPQDG AMSHSFFDEDFDVRVSTIPTCCGEGIVLRVLSKNISLFNLESLGFEPDTRDKLEKQLKRPHGILLVTGPTGSGKTTTLYA SLRKINSLQRKILTAEDPIEYKFPFIKQTQLNLKAGYTFPRAMRAFLRQDPDVILLGEMRDEETAEMAMRASITGHLVLS TLHTNDAVTAIPRLMEMKIKDYMIASGVGGILSQRLIRKTCCSCQEETSESVAELISKGIPEEVFTKHGYSPDGEIIYKQ GKGCAFCRNTGYAGRGVISELLVIDQEIGELIVTGATPMTIFRKAVTNGMIPIIESGLIKVMHGITTPDEILRVAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-73 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-73 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dacet_0337 | YP_003503093.1 | type II secretion system protein E | VFG2048 | Protein | 4e-72 | 43 |
| Dacet_0337 | YP_003503093.1 | type II secretion system protein E | VFG1876 | Protein | 3e-68 | 42 |
