Gene Information

Name : Dacet_2908 (Dacet_2908)
Accession : YP_003505614.1
Strain : Denitrovibrio acetiphilus DSM 12809
Genome accession: NC_013943
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3107121 - 3108047 bp
Length : 927 bp
Strand : +
Note : TIGRFAM: porphobilinogen deaminase; KEGG: vfm:VFMJ11_0064 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGGAAAAAGTAGTTATAGCAACCCGTGGAAGCAATCTTGCCCTTTGGCAGGCATACTATACCAGAGACAGGCTCCAGAA
AGAGCACGGTGTGGAAGTCGAGCTGAATATAATCAAAACCAAAGGGGATAAGATTCTCGATGTCCCTTTGGCAAAAATAG
GCGGAAAAGGTCTTTTTGTCAAAGAGATAGAGCAGGCGCTTATAGACGGGAAAGCTGACATCGCTGTCCACAGCATGAAG
GACGTTCCTATGGAAATGCCAGAAGGGCTGGAACTTTATGCCTCCCCTGAAGGGGCATCCCCCTATGACTGCTTTGTTTC
TGTCAAATATAATGAAGTGGTGGAATTGCCGCAGGGGGCAGTTGTCGGGACTAGTAGTCTCAGGCGTAAGCTTCAGCTTC
TTAAAATGCGCCCAGACCTCGTTATCAAAGATCTCCGGGGCAATGTAAACACCCGGCTTGCCAAGCTTGAGGCGGGCGAA
TTTGACGGTATTGTGCTCGCGAAAGCCGGACTTGTTCGCCTGGAACTCGGACATGTTATAAAAGAAACTTTTACCGCAGA
CCAGATGCTCCCCGCTTGTTGTCAGGGCGCGCTGGGCTTTCAGATAAGAGCAAATGACACACGCATGAAAGAGCTGCTTA
GGTTCATGAAAGACCCTGCCACAGAAACAAAAGTTTCGATGGAGAGGGCGTTTCTCCGCAGGCTTGAAGGTGGCTGTCAG
GCTCCTATCGCAGGGCACTCTGTGCTTACAGGCAGTAAAATATGTATGAAAGGGATTGTCGCCGCTCTGGACGGCAGGAC
TTTTATCGAGCAGTTTATAGAAGGGCATGCAGAGGACGCCGAAAAGCTTGGGCTTGAGCTTGCTGAAAGGGTACTGAATG
CAGGAGCCAAAGATATTCTGGAAGAGATATACTCTCAGGCGGATTAA

Protein sequence : 
MEKVVIATRGSNLALWQAYYTRDRLQKEHGVEVELNIIKTKGDKILDVPLAKIGGKGLFVKEIEQALIDGKADIAVHSMK
DVPMEMPEGLELYASPEGASPYDCFVSVKYNEVVELPQGAVVGTSSLRRKLQLLKMRPDLVIKDLRGNVNTRLAKLEAGE
FDGIVLAKAGLVRLELGHVIKETFTADQMLPACCQGALGFQIRANDTRMKELLRFMKDPATETKVSMERAFLRRLEGGCQ
APIAGHSVLTGSKICMKGIVAALDGRTFIEQFIEGHAEDAEKLGLELAERVLNAGAKDILEEIYSQAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-65 54
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-65 54