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Name : Dacet_2379 (Dacet_2379) Accession : YP_003505097.1 Strain : Denitrovibrio acetiphilus DSM 12809 Genome accession: NC_013943 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2513834 - 2515102 bp Length : 1269 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: sfu:Sfum_1424 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGCTTGATATCAAATATATCATTGCTAATATTGACGAAGTTAAAAAGAAGACGGCAGACAGAGGGGCGCAGTTCGATTT CGATCTGCTGATATCTCTGGATGAGAAACGTAAAAGTCTTCAGGCTGAGAATGACGTTTTGAAAGCTGAGCGCAATAAAG TTAGCAAAGAGATCGGCGCGATTAAGAGAGCCGGCGGTGATATATCGGAGATTCAGGCAAAAATGCGTAATGCAGGTGAC AGGATATCTGCTATAGACGCTGAACTTACGGAAGCTCAGGAACAGATGACTGACATGCTTCTCACTATACCTAATTTAAT TAAAGACGAAGTGCCTGTTGGCGCTGACGAAAATGATAATGTATTATTTCGTTCATGGGGGGAGCCGAAGAAATATTCTT TCGAGGCTAAACCTCACTGGGATATTGCCGAAGGGCTTGGTCTCGTTGATTTTGAACGTGGTGTTAAGATTGCCCAGTCA CGCTTCTCTGCTTATATGGGACTGGGAGCTAAGCTGGAAAGAGCTCTTATAAACTTCATGCTGGATGCCCATGCAGAGAG GGGATATAAAGAGGTACTGGCGCCATACCTTGTTAACGCTGAAGCGATGAAAGGGACAGGACAGCTTCCTAAATTCGAAG AAGATGCGTTCAAATGTGAGAAAGACGGACTGTATCTTATTCCTACTGCGGAAGTCTCTGTTACAAACCTTTACTCTCAG GAAATACTTGATGAAGAGATGCTCCCTGTGAAGCACTGTTCATATTCTGCATGTTTCAGGCGTGAGGCAGGCTCACACGG AAAAGATGTGAGAGGGCTTATCCGCCAGCATCAGTTCAATAAAGTGGAACTGGTTAAGGTTGTTAAACCGGAAGACTCCG ATACAGAGCTTATGGAACTCCTTGAGTCAGCGGAGATGATACTTCAGAAACTGAATATCCCATACCGTATTATGACCCTT TGCAGCGGCGACCTTGGGTTTTCATCAGCTAAAACATTTGATATTGAAGTATGGCTTCCTTCTCAGGGCGGCTATAGAGA AATTTCATCATGTTCAACATTTATGGACTTTCAGGCGAGACGTGCTTCCATACGTTTCCGCAGGAAAGGGGATAAAAAAG TTGAATTTGCACATACACTTAACGGGTCAGGGCTTGCTGTCGGGCGGACTTTCCTCGCCATACTCGAAAACTATCAGAAC GAAGATGGCACTGTAACTGTACCGGAAGCTCTCAGACCATACCTGAACGGACTTGAGGTGATAGATTAA Protein sequence : MLDIKYIIANIDEVKKKTADRGAQFDFDLLISLDEKRKSLQAENDVLKAERNKVSKEIGAIKRAGGDISEIQAKMRNAGD RISAIDAELTEAQEQMTDMLLTIPNLIKDEVPVGADENDNVLFRSWGEPKKYSFEAKPHWDIAEGLGLVDFERGVKIAQS RFSAYMGLGAKLERALINFMLDAHAERGYKEVLAPYLVNAEAMKGTGQLPKFEEDAFKCEKDGLYLIPTAEVSVTNLYSQ EILDEEMLPVKHCSYSACFRREAGSHGKDVRGLIRQHQFNKVELVKVVKPEDSDTELMELLESAEMILQKLNIPYRIMTL CSGDLGFSSAKTFDIEVWLPSQGGYREISSCSTFMDFQARRASIRFRRKGDKKVEFAHTLNGSGLAVGRTFLAILENYQN EDGTVTVPEALRPYLNGLEVID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-108 | 55 |
