Gene Information

Name : Dacet_2311 (Dacet_2311)
Accession : YP_003505029.1
Strain : Denitrovibrio acetiphilus DSM 12809
Genome accession: NC_013943
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 2441098 - 2442405 bp
Length : 1308 bp
Strand : -
Note : SMART: AAA ATPase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: pca:Pcar_1189 flagellum-specific ATP synthase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPas

DNA sequence :
ATGAAGAATTTAGCCCGACTGAAGAGGGTTGACCACAAGGCTTCCCTCCAGATAAAAGGAAAAGTTACAAAGATTGTCGG
ACTCACTATAGAGGCGGACGGTCCGCTGCTCGGTATCGGTACCAGATGCAGTATAGAGAGTATGGACGGCAGACGCATTC
TTGCAGAGATTGTGGGCTTTAAGGACGACCGCATCATCCTTATGCCGTATGGCGAAAGTGAGGGGATAGCCCCCGGAAGC
CATGTGACGAACGAATCCTACGGCAACACTGTAAAAGTATCAGATAGCCTTCTCGGGCGTGTTCTGGATGGTCTCGGTAA
TCCCATGGACGGCAAAGGACCAATAACGGATTTCGAACTTGTTAATGTTTATCAGTCGCCTCCCCAGGCGCTCGAACGTG
AGATAATTAAAACACCTGTTTCGACAGGGATCAAAGCGATAGACAACCTTATAACAATTGGTCGTGGTCAGAGGGTCGGT
ATTTTTGCCGGTTCCGGTGTGGGTAAATCAGTGACCCTTGGTATGATAGCGAGGGATTCTGATGCAGATGTTAACGTAAT
AGCCCTTATCGGTGAGCGTGGTCGTGAAGTGCGTGAGTTTATCGAGCGTGACCTTGGCGAAGAGGGGCTTAAGCGCAGTG
TCCTCGTTATCGCCACGTCTGATCAGTCTGCTCTGATAAGAAAGCTCGGGGCGTTTGTAGGGACTGCCATAGCGGAGTAT
TTCCGCAGTAAAGGGCTTAATGTTATGCTGATGATGGACTCTGTGACACGTTTCGCTATGGCGCAGCGTGAGATAGGGCT
TACAGTGGGGGAACCGCCAACAACAAAAGGATATACACCCTCTGTCTTTGGTCTGCTCCCAAAACTTCTGGAACGTGCCG
GAACACAAAAAGGTAAAGGGAATATTACAGGTTTGTACACCGTACTGGTGGAGGCGGACGATATGAATGACCCGATAGGT
GATTCCGTACGTTCAATTATAGACGGGCACATAGTCCTTTCCAGAGGGCTTGCAGCAAAGAATCATTATCCGGCAATAGA
CGTCCTCAGCAGTGCCAGCAGGCTTATGAAAGAGATTGTGAATGACAAGCAGTATGCCAATGCCGGGCGGATGCGTGACC
TGCTCGCCAGCTATAACGAAGCGGAAGACCTCATTAACATCGGCGCATACGTAAAGGGGAGCAATCCGAAGATCGATGAA
TCCATAGCGAAGATCGGGCAGATCGAACAATTTCTCAGGCAGGGCATAGACGATTCAATTAATTTTGAAGAGAGCACAAA
ACTGCTTGATGCCATCATAGCTAAATAA

Protein sequence :
MKNLARLKRVDHKASLQIKGKVTKIVGLTIEADGPLLGIGTRCSIESMDGRRILAEIVGFKDDRIILMPYGESEGIAPGS
HVTNESYGNTVKVSDSLLGRVLDGLGNPMDGKGPITDFELVNVYQSPPQALEREIIKTPVSTGIKAIDNLITIGRGQRVG
IFAGSGVGKSVTLGMIARDSDADVNVIALIGERGREVREFIERDLGEEGLKRSVLVIATSDQSALIRKLGAFVGTAIAEY
FRSKGLNVMLMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFGLLPKLLERAGTQKGKGNITGLYTVLVEADDMNDPIG
DSVRSIIDGHIVLSRGLAAKNHYPAIDVLSSASRLMKEIVNDKQYANAGRMRDLLASYNEAEDLINIGAYVKGSNPKIDE
SIAKIGQIEQFLRQGIDDSINFEESTKLLDAIIAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-102 53
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-98 52
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-99 52
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-99 52
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-98 52
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-98 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-98 52
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-98 52
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-96 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-96 51
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-86 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-80 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-80 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-81 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-81 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-81 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-82 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-82 48
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-84 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-86 47
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-86 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 7e-87 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-86 47
escN AAC31513.1 L0034 Virulence LEE Protein 1e-86 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-86 47
escN AAC38383.1 EscN Virulence LEE Protein 1e-86 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-86 47
escN AAK26715.1 EscN Virulence LEE Protein 3e-86 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-86 47
escN AAL57542.1 EscN Virulence LEE Protein 3e-86 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-86 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-77 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-87 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-82 46
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 8e-82 46
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-82 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-76 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-87 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-77 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-77 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-78 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-78 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-79 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 1e-68 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG0192 Protein 7e-108 53
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG2144 Protein 1e-105 53
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG0390 Protein 2e-103 52
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-103 51
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG1254 Protein 9e-98 49
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-81 48
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG2331 Protein 6e-92 47
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG0730 Protein 6e-87 47
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG0812 Protein 7e-87 47
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG2499 Protein 6e-91 46
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-70 42
Dacet_2311 YP_003505029.1 flagellar protein export ATPase FliI VFG2459 Protein 4e-71 42