Gene Information

Name : Dacet_2144 (Dacet_2144)
Accession : YP_003504862.1
Strain : Denitrovibrio acetiphilus DSM 12809
Genome accession: NC_013943
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2265553 - 2266299 bp
Length : 747 bp
Strand : +
Note : KEGG: gem:GM21_3726 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAACACTGATTATGCCATACAGGTACGCAACCTTACAGTCAGCTACGGTCCCAAGCCCGCACTGCTTGACGTAAGCTT
TTTCATAAATAAAGGTGAGCTGGTCGGGATAATAGGTCCCAACGGAGCAGGAAAATCAACACTTATGAAAGCGATACTCG
GTTTTGTCAAAAGGGATATAGGCGAAGTCTTCATATTCGGCAAACCGGTAGAACATACAAGAGGGCTTGTGGCATATGTG
CCGCAAAGGGGAACAGTTGACTGGGACTATCCGGTAACGGTACACGATGTTGTAATGATGGGGCGTTATGGTCACCTTAA
GTGGTGGCAGAACGAAACAAAAGAAGATCACGATATAGTAGACAGAAGCCTTGAAATGGTTCGTATGTCAGAATTCCGCA
ACAGACAGATAGGACAGCTCTCCGGCGGGCAGCAGCAGCGTGTCTTCATGGCGAGGGCTCTTGCGCAGGGTGCTAAAATC
CTGCTTCTTGATGAACCATTTGCCGGAGTGGATGCAGCTACAGAAAACGCTATTCTTGACGTTCTTTCTGAAGCGAAGAA
AGCAGGGATAACACTTGTCGTTGTCCACCACGACCTTGCAACCGCATCAGAATATTTCGACAAGCTTCTTCTTATCAAAC
AGAGACTTTATGCTGCGGGGCCCCCGTCGCTTGTCTTCAGGCAGGAACTTCTGACCGAGGTTTACGAAGGGAAGCTTAAA
GTATTTACTGATCTCATAAAGGATTGA

Protein sequence : 
MNTDYAIQVRNLTVSYGPKPALLDVSFFINKGELVGIIGPNGAGKSTLMKAILGFVKRDIGEVFIFGKPVEHTRGLVAYV
PQRGTVDWDYPVTVHDVVMMGRYGHLKWWQNETKEDHDIVDRSLEMVRMSEFRNRQIGQLSGGQQQRVFMARALAQGAKI
LLLDEPFAGVDAATENAILDVLSEAKKAGITLVVVHHDLATASEYFDKLLLIKQRLYAAGPPSLVFRQELLTEVYEGKLK
VFTDLIKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-50 45
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-50 45
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-51 45
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-50 45
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-50 45
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-42 43
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacet_2144 YP_003504862.1 ABC transporter-like protein BAC0400 Protein 3e-53 52
Dacet_2144 YP_003504862.1 ABC transporter-like protein BAC0440 Protein 2e-49 46
Dacet_2144 YP_003504862.1 ABC transporter-like protein BAC0350 Protein 5e-51 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacet_2144 YP_003504862.1 ABC transporter-like protein VFG0526 Protein 5e-51 45