Gene Information

Name : Dacet_1603 (Dacet_1603)
Accession : YP_003504325.1
Strain : Denitrovibrio acetiphilus DSM 12809
Genome accession: NC_013943
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 1671502 - 1673283 bp
Length : 1782 bp
Strand : -
Note : KEGG: wsu:WS1265 ABC transporter ATP- binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase

DNA sequence :
ATGAAGCAAGTTAATAATAAAGTTCTTAACCTCAGGGAATCATACCAGATGTCTCTGGAAATTTCTGATGACAGGAGCGC
AGGTTTTAAAAAAATGTGTATCTTGTTTATCATTGCCTATATAGCACAGGGGGTATCCTTTACATGTTTCTTCCCTGTTC
TTGTATACAGTTTCGGTGAGAATGCAGACCCTTCAAAGGCATTTTTCTGGCTCGGGGTGATGGCATCCCTTGCTTTTGTC
GATTCTCTGCTTCGCTGGTTTGCGTACAGGCATGATTATCATGGTCACATAGTGGACATTACAAACAGCCTCCGTGTAAA
GCTTGGGAAGAAGCTGCGCACTATGCCTCTTGAAATACTTTATAGCAGGAGGACAGGTGAACTGAATTCTGTTCTGGCAA
ACAATGTTGAAGAGTCTGTTATGCATATGGGAGTTCTTGCCGGTCAGATATTACAGACATTTTTTATCCCTTTCGGTGTG
CTTGTCGTGACGGTATTCATCGATTGGCGTCTGGCGGGGGCACTGCTCCTTATACTTCCTATGGCGATCCCTGTCTATAA
ATGGCGAAGGCGGCTTTCTCAACAGGAAAAACAGGATGTTGCCGACGCTCACGCTGAAGTTGGCAGTGACATAGTTGAAT
ATATACAGGGAGTTCATGTCCTTCGTGCTTTGAATATGACAGGAGAGAAAGCACAATCTTTGCAGACTTCCCTTAAAAAG
CTTAAAAACATACAGAAAGAAGCGTCAACCATGACAGTTCTCCCGTCTCTGGTTATGGCTGCTGTGGTTGAAATCGGTCT
TCTGGTGGTTCTGGTATTAGGAGCTTATCTGATAAAAGGCGGCTCGCTGACTATTCCGGTTATGGCTGCACTTCTTGTGG
CTGTTTCACGCCTTACCGAGCCTTTATCCCTGTTTGTTCATATTGCAACAATGTTTGACATAATGGGGGCGGGATTTGGC
AGGATAAAGGAGCTGATGGGAGAGAAAGAGCTTGATATAGAAGGGCAAGGAGAGATGCCTGACAGTTTTGAAATAGAATT
TGAAGGTGTTGACTTTCTATATAAGGATACAGAAATGAAAGCCCTTGATAATGTCAGCCTTAAAATGGAGAAAAATTCCA
TGACTGCTCTTGTGGGACCTTCCGGTTCGGGTAAAACAACAATAGCTAAAATGATAATGAGATATGCAGACCCTGCAAAA
GGGAGCATTAAAATAGGCGGTAAAGATATACGAAGCTTTCAGCCGGATGACCTGATGAAGATGCTGTCTGTTGTATTTCA
GGATGTATATCTTTTTGATGACACAATACTAAATAACATCAGAATGGGACGCCCGGACGCAACAGACGAAGAGGTTATGA
CGGCTGCCCGCAGTGCATATTGCCACGAGTTTATTCAGCGTCTGCCTGACGGGTACGGAACAAAAGCAGGAGATATTGGC
GGGAGTCTTTCAGGCGGGGAGAAACAGCGCATTAGCATTGCCCGCGCCATACTGAAAGATGCCCCGATAGTTATACTGGA
TGAGCCTACAGCAGCTCTGGATACTGAAAGTGAGCTTGCTGTTCAGAGGGCTATTGATGCTCTTGTATATGACAGAACTG
TTATAGTAATAGCTCACAGACTATCCACCATTGCCGGAGCTGACAGTATTATTGTTATGGATGAAGGCAGGGTTCGAGAA
TCCGGCTGTCATAGTGACCTGCTGAAGCTTAATGGCAAATATAAGGCGATGTGGGAATCTCAAAAGAGGGTGCAGGAATG
GCAGATTCATGTAAGTGCATAA

Protein sequence :
MKQVNNKVLNLRESYQMSLEISDDRSAGFKKMCILFIIAYIAQGVSFTCFFPVLVYSFGENADPSKAFFWLGVMASLAFV
DSLLRWFAYRHDYHGHIVDITNSLRVKLGKKLRTMPLEILYSRRTGELNSVLANNVEESVMHMGVLAGQILQTFFIPFGV
LVVTVFIDWRLAGALLLILPMAIPVYKWRRRLSQQEKQDVADAHAEVGSDIVEYIQGVHVLRALNMTGEKAQSLQTSLKK
LKNIQKEASTMTVLPSLVMAAVVEIGLLVVLVLGAYLIKGGSLTIPVMAALLVAVSRLTEPLSLFVHIATMFDIMGAGFG
RIKELMGEKELDIEGQGEMPDSFEIEFEGVDFLYKDTEMKALDNVSLKMEKNSMTALVGPSGSGKTTIAKMIMRYADPAK
GSIKIGGKDIRSFQPDDLMKMLSVVFQDVYLFDDTILNNIRMGRPDATDEEVMTAARSAYCHEFIQRLPDGYGTKAGDIG
GSLSGGEKQRISIARAILKDAPIVILDEPTAALDTESELAVQRAIDALVYDRTVIVIAHRLSTIAGADSIIVMDEGRVRE
SGCHSDLLKLNGKYKAMWESQKRVQEWQIHVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtQ NP_669703.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 1e-117 44
ybtQ NP_993010.1 ABC transporter permease Virulence HPI Protein 1e-117 44
ybtQ YP_070127.1 ABC transporter permease Virulence HPI Protein 1e-117 44
ybtQ CAA21387.1 - Virulence HPI Protein 1e-117 44
irp7 CAB46572.1 inner membrane ABC-transporter, Irp7 Virulence HPI Protein 3e-117 44
irp7 YP_001006812.1 inner membrane ABC-transporter YbtQ Not tested HPI Protein 3e-117 44
irp7 YP_002346905.1 ABC transporter permease Not tested HPI Protein 1e-117 44
APECO1_1055 YP_853072.1 ABC transporter Not tested PAI IV APEC-O1 Protein 2e-118 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacet_1603 YP_003504325.1 ABC transporter-like protein BAC0433 Protein 5e-118 44