|
Name : Dacet_1085 (Dacet_1085) Accession : YP_003503813.1 Strain : Denitrovibrio acetiphilus DSM 12809 Genome accession: NC_013943 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1138694 - 1140262 bp Length : 1569 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: gur:Gura_0559 integrase catalytic subunit DNA sequence : ATGCGACGACGCAAGAAAGGAAGGTTAACAATGAAATATCTTCGTGAAGTAATCCGCCTTTACAATCTGGGCGGTCTCAG CAACCGTCAGATAGCCAAAGCCTGCAATGTATCACCAACGACAGCAGGCGGATGCATCAACAAGTACATAGATTCAGGCA TACCTTATGAAACATTTGCCGAGCTTCCGGACGAGAAGCTTGAGTCAATCTTTTACCCCAAAGAACCAGATCAGCCAGTA TACTCCCGCCCAATGCCGGATATGGAGTACCTTTGCAAAGAGCTTAAGCGCAAAGGGGTGACTCTTCAGCTTCTCTGGGA AGAGTATATTCGTGAGAATCCCGGAGGCTACAGCCGTTCCCAGTTCTCTTACCACTATCAGCAGTGGAGTAAAAAGATTA ATCCGACGATGCGGTTTAATCATAAAGCAGGCGAGAAGGTATTTGTAGACTTCTCCGGTTACAAGCCTGAGATCGTAAAT CCAATAACAGGCGAGGTGACATCAGTAGATCTCTTTGTAGCGACCTTAGGAGCAAGTTCATACACCTATGCGGTATGTGT TCCTGACCAGACGAAAGAGTTCTGGATAGAAGCCCATGTAAAGATGTTCGATTTCTTCGGCGGCGTTCCTGAATGCATAG TGCCGGATAATCTTAAGTCTGGAGTAACGTCCCCATGCTTTTACGATCCTGATATAAATCCCGGTTACGCAGACATGGCG GCGCATTACGGCATCGCAGTTGTCCCCGCAAGACCAGGTAAACCAAAGGATAAGGGTAAAGTAGAGAACGGCGTACTTAA CGTTCAGCGCCGTATCCTTGCTGTACTCCGTAACCGCACATTCAACAGCATACAGGAACTCAACAGCGCAGTGGCGGAAG AGCTTGTAAATCTTAACGACAGACCCATGCAGCACATGAAGTCATCCCGCAGACAGCTGTTCAAAGAATTAGACCAGCCT GCACTGAAACCTCTCCCATTTGAAAGATTCGAACAGTACAGCTGGAAAAAAGCCAAGGTGAATTTCAACTATCATGTGCA GATTGGAGATGCTCACTACAGTGTCCCATGGCGACTTATGGGCGAAACTGTAGATATCAAATACAACAGCAGGATAGTTC AGATACTGCATAAGAATAAATGTATAGCATCACACCCTCGGTCTTTTAAGCGTGGATACTATGCTACCTCTGCCGCCCAC ATGCCGCCCAATCATCAGTTCGTCGCCTCAGGCTGGACACCAGAGAGAATGAACAAATGGGCGTCAAAGACAGCCGGAGT GTACACCGCCAAAGCAATAGATGCCATTATAGACAGCAGGCAGTTTCCGGAACAGGCTTACAAGAGCTGTATGGGTGTTA TTAAGCTTTCGAAGTATTACCCGCCGGAAAGACTTGAGAAGGCATGCCGTATGGTTCTGGAGAGCGGCACTGTCAGATAT AACAGCATTAAGTCTATCCTTGAAAAAGGTCTGGATAAAATACACTACCTTGAAGGAGAACCAAGAAAGAATCTTGTCCA TGAGAATATCAGGGGCAATGAGTACTACCGTATAAAAGGAGATGATTGA Protein sequence : MRRRKKGRLTMKYLREVIRLYNLGGLSNRQIAKACNVSPTTAGGCINKYIDSGIPYETFAELPDEKLESIFYPKEPDQPV YSRPMPDMEYLCKELKRKGVTLQLLWEEYIRENPGGYSRSQFSYHYQQWSKKINPTMRFNHKAGEKVFVDFSGYKPEIVN PITGEVTSVDLFVATLGASSYTYAVCVPDQTKEFWIEAHVKMFDFFGGVPECIVPDNLKSGVTSPCFYDPDINPGYADMA AHYGIAVVPARPGKPKDKGKVENGVLNVQRRILAVLRNRTFNSIQELNSAVAEELVNLNDRPMQHMKSSRRQLFKELDQP ALKPLPFERFEQYSWKKAKVNFNYHVQIGDAHYSVPWRLMGETVDIKYNSRIVQILHKNKCIASHPRSFKRGYYATSAAH MPPNHQFVASGWTPERMNKWASKTAGVYTAKAIDAIIDSRQFPEQAYKSCMGVIKLSKYYPPERLEKACRMVLESGTVRY NSIKSILEKGLDKIHYLEGEPRKNLVHENIRGNEYYRIKGDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 2e-87 | 43 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 2e-87 | 43 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 1e-87 | 43 |
