Gene Information

Name : fepD (G2583_0753)
Accession : YP_003498360.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 792269 - 793273 bp
Length : 1005 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAG
CCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCTTCTCCGGCACCTGCCAGAGCGCCGACTGCA
CCATCGTGCTCGACGCGCGGCTGCCGCGTACCCTTGCCGGTTTACTGGCAGGCGGCGCGCTTGGCCTTGCCGGGGCGTTA
ATGCAAACCCTCACCCGAAACCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTTTGCCATTGTGCT
GGGTGCGGCGCTGTTTGGTTACTCTTCCGCACAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCGTTGA
TTGTTGCCTTTACCGGCAGCCAGGGCGGTGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGGCTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAACTGCGTTTCTGGCAAGCCGGTTC
GCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCAGTGCTGATCGCCGGAGCAACTGCGCTATTACTGA
GTCGCGCGCTGAACAGTTTAAGCCTTGGCAGCGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGCACACAGTTGATT
GGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCGGTAGTTGGCCCTATTGCCTTTATTGGCCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTTGCTACCCCTGCCCTGCTGC
TGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGTGAACTGCGCGTTTCTGTGGTCAGTGCGTTTATTGGTGCACCG
GTGCTGATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA

Protein sequence :
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAP
VLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-28 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-28 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-28 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-28 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_003498360.1 Fe3+-siderophore ABC transporter permease VFG0926 Protein 3e-103 99