Gene Information

Name : espF (G2583_4405)
Accession : YP_003501856.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : espF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4476749 - 4477513 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence :
ATGCTTAATGGAATTAGTAACGCTGCTTCTACACTAGGGCGGCAGCTTGTAGGTATCGCAAGTCGAGTGAGCTCTGCGGG
GGGAACTGGATTTTCTGTAGCCCCTCAGGCCGTGCGTCTTACTCCGGTGAAAGTTCATTCCCCTTTTTCTCCAGGCTCGT
CGAATGTTAATGCGAGAACGATTTTTAATGTGAGCAGCCAGGTGACTTCATTTACTCCCTCTCGTCCGGCACCGCCGCCA
CCGACAAGTGGACAGGCATCCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTA
TGAAAAATCGAAAGGTCCTGAGGCTTTAGGTTTTAAGCCCGCCCGTCAGGCACCGCCGCCACCGACAAGTGGACAGGCAT
CCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTATGAAAAATCGAAAGGTCCT
GAGGCTTTAGGTTTTAAGCCCGCCCGTCAGGCACCGCCGCCACCGACAAGTGGACAGGCATCCGGGGCATCCCGACCTTT
ACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTATGAAAAATCGAAAGGTCCTGAGGCTTTAGGTTTTAAGC
CCGCCCGTCAGGCACCGCCGCCACCGACAAGTGGACAGGCATCCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCA
TTAAAAGATCATTTAGCTGCCTATGAGCAATCGAAGAAAGGGTAA

Protein sequence :
MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVKVHSPFSPGSSNVNARTIFNVSSQVTSFTPSRPAPPP
PTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGP
EALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQA
LKDHLAAYEQSKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31495.1 L0016 Not tested LEE Protein 1e-93 96
unnamed ACU09440.1 LEE associated secreted protein EspF Virulence LEE Protein 1e-93 96
espF NP_290250.1 hypothetical protein Virulence LEE Protein 2e-93 96
ECs4550 NP_312577.1 protein EspF Virulence LEE Protein 2e-93 96
espF AAC38400.1 EspF Virulence LEE Protein 3e-62 88
espF CAI43856.1 EspF protein Virulence LEE Protein 3e-64 80
espF YP_003223457.1 T3SS effector EspF Virulence LEE Protein 4e-64 80
espF AAL60256.1 EspF Virulence LEE Protein 8e-50 78
espF CAC81880.1 EspF protein Virulence LEE II Protein 8e-50 78
espF YP_003232171.1 T3SS effector EspF Virulence LEE Protein 1e-49 78
espF YP_003236070.1 T3SS secreted effector EspF Virulence LEE Protein 1e-70 68
unnamed AAL06387.1 EspF Virulence LEE Protein 2e-67 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espF YP_003501856.1 espF VFG0794 Protein 9e-94 96
espF YP_003501856.1 espF VFG0748 Protein 2e-62 88