Gene Information

Name : lpfB (G2583_4287)
Accession : YP_003501740.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : fimbrial chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4345344 - 4346042 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGGATCGAATGATGAAAAGTAAATTTGTTGCGTTGGCTCTCTCTCTGTTCCTTTCACAGTCAGTTCTGGCGGGTGGCGT
CGGACTTAGCTCTACTCGCGTAATTTATGATGGCAGTAAGAAAGAAGCCTCGCTGACCGTACAGAATAAAAGTAAGACGG
AAGAGTTTCTTATCCAATCCTGGGTGGATGATGCCGCGGGCAGCAAAAAAACACCGTTTATTATTACGCCCCCACTATTC
AAGCTTGATCCAGAAAAGAACAATATTTTGCGTATTGTGAATATTACGCCCGGCCTGCCTCAGGATCGCGAATCGGTCTA
CTGGGTTAATGTGAAAGCCATTCCATCTAAAAGTGACGACAGCGAAAACAAAAATGTTTTGCAGATTGCCGTTCGCACCC
GAATCAAACTTTTTTATCGCCCGGCAGGTTTAAAGGGTGATGTAAAAACCGCGCCAAATGAACTGCGATTTACGCGTAAC
GGTAATCAGCTCCGCGTTGATAATCCGACAGTTTTTAATATTACCTTTAATCAATTTTTTGCGAATGACAAAGAAATTGA
AAAAGCAGGCATGGTACCCGCTAAAGGGGCATTAAATATCACATTACCCGCCGGGGTAGGTAGCGTTTCTAAAATTAAAT
ATAACACCATCAATGACTTTGGATCGTCAGCGGAAATGATCACTAAAAATGTTGATTGA

Protein sequence : 
MDRMMKSKFVALALSLFLSQSVLAGGVGLSSTRVIYDGSKKEASLTVQNKSKTEEFLIQSWVDDAAGSKKTPFIITPPLF
KLDPEKNNILRIVNITPGLPQDRESVYWVNVKAIPSKSDDSENKNVLQIAVRTRIKLFYRPAGLKGDVKTAPNELRFTRN
GNQLRVDNPTVFNITFNQFFANDKEIEKAGMVPAKGALNITLPAGVGSVSKIKYNTINDFGSSAEMITKNVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-42 44
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpfB YP_003501740.1 fimbrial chaperone VFG0455 Protein 4e-77 69
lpfB YP_003501740.1 fimbrial chaperone VFG0875 Protein 2e-41 44
lpfB YP_003501740.1 fimbrial chaperone VFG1644 Protein 9e-41 43
lpfB YP_003501740.1 fimbrial chaperone VFG0911 Protein 8e-41 43
lpfB YP_003501740.1 fimbrial chaperone VFG0445 Protein 4e-44 42