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Name : gspD (G2583_3686) Accession : YP_003501161.1 Strain : Escherichia coli CB9615 Genome accession: NC_013941 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3732788 - 3734848 bp Length : 2061 bp Strand : - Note : - DNA sequence : GTGTTTTGGCGTGATATTACGTTGTCGGTCTGGCGTAAGAAGACAACTGGCCTCAAAACAAAAAAGCGTTTACTGCCGCT GGTGTTGGCAGCGGCATTATGCAGTTCACCGGTCTGGGCAGAAGAAGCCACTTTCACCGCTAATTTTAAAGATACCGACC TGAAATCGTTCATCGAAACCGTCGGCGCTAACCTTAATAAAACCATCATTATGGGGCCGGGCGTTCAGGGGAAAGTGAGT ATTCGCACCATGACCCCGCTCAATGAACGTCAGTATTACCAGCTATTCCTTAACCTGCTGGAAGCACAGGGGTATGCCGT CGTACCGATGGAAAACGACGTGCTGAAGGTGGTGAAATCCAGTGCCGCGAAAGTCGAGCCGCTGCCGCTGGTTGGTGAAG GCAGCGACAACTACGCGGGCGATGAAATGGTCACCAAAGTAGTGCCGGTACGTAATGTGTCGGTACGCGAGCTGGCACCG ATTCTGCGCCAGATGATCGACAGCGCAGGCTCAGGCAACGTTGTTAATTACGATCCCTCCAACGTGATTATGCTCACCGG ACGCGCCTCCGTTGTGGAGCGCCTGACGGAAGTGATCCAGCGCGTGGATCACGCGGGTAATCGCACCGAAGAGGTGATCC CGCTGGATAACGCCTCGGCTTCGGAAATCGCCCGCGTGCTGGAAAGCCTGACGAAAAACAGCGGCGAGAACCAGCCTGCG ACGCTGAAATCTCAAATTGTCGCCGACGAACGCACCAACAGTGTGATTGTCAGTGGTGACCCGGCCACGCGGGACAAAAT GCGCCGTCTGATCCGTCGGCTGGACTCAGAAATGGAGCGCAGCGGCAACAGCCAGGTTTTCTATCTCAAATACAGCAAAG CGGAAGATCTGGTCGATGTGCTGAAGCAGGTCAGCGGCACGCTCACGGCGGCTAAAGAAGAGGCGGAAGGCACGGTCGGT AGCGGGCGTGAGGTTGTCTCCATCGCCGCCAGCAAACACAGTAATGCCCTGATTGTAACCGCGCCGCAGGACATCATGCA GTCGCTGCAAAGCGTTATTGAACAACTGGATATTCGCCGTGCTCAGGTGCATGTCGAGGCGTTGATCGTGGAAGTGGCCG AAGGCAGTAATATCAACTTCGGCGTGCAGTGGGCGTCGAAAGATGCCGGATTAATGCAGTTTGCTAATGGTACGCAGATC CCTATCGGTACGCTGGGGGCAGCCATTTCTCAGGCGAAACCGCAGAAAGGCTCGACGGTGATCAGTGAAAACGGCGCTAC CACCATTAATCCGGATACCAACGGCGATCTCTCCACGCTCGCCCAGCTTCTTTCCGGCTTTAGCGGTACGGCGGTTGGCG TGGTGAAAGGCGACTGGATGGCGCTGGTACAGGCGGTTAAAAACGACTCCAGCTCGAACGTTCTCTCCACGCCGAGCATC ACCACGCTGGACAACCAGGAAGCCTTCTTCATGGTGGGTCAGGATGTTCCGGTATTAACCGGCTCTACCGTTGGCTCCAA TAACAGCAATCCTTTCAATACAGTAGAAAGGAAAAAAGTCGGCATCATGCTGAAAGTCACGCCGCAGATTAACGAAGGTA ACGCGGTACAGATGGTGATTGAGCAGGAAGTCTCGAAGGTGGAAGGACAGACGAGCCTCGACGTGGTGTTTGGTGAGCGC AAACTGAAGACCACCGTGCTGGCTAACGATGGTGAACTGATCGTGCTTGGCGGTCTGATGGACGACCAGGCGGGAGAAAG TGTGGCGAAAGTGCCGCTGCTTGGCGATATCCCATTGATTGGTAACCTGTTTAAATCGACGGCGGATAAAAAAGAAAAAC GTAACCTGATGGTGTTTATCCGCCCGACCATTCTGCGTGACGGTATGGCGGCAGACGGCGTGTCGCAGCGTAAATATAAC TACATGCGCGCCGAGCAGATCTATCGCGATGAGCAAGGCTTAAGCCTGATGCCGCACACCGCGCAGCCGGTACTGCCAGC GCAAAACCAGGCCTTACCGCCGGAAGTACGCGCATTCCTCAATGCCGGGAGAACGCGTTAA Protein sequence : MFWRDITLSVWRKKTTGLKTKKRLLPLVLAAALCSSPVWAEEATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVS IRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELAP ILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPA TLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEAEGTVG SGREVVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFANGTQI PIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSI TTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLDVVFGER KLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTILRDGMAADGVSQRKYN YMRAEQIYRDEQGLSLMPHTAQPVLPAQNQALPPEVRAFLNAGRTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 0.0 | 100 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspD | YP_003501161.1 | general secretion pathway protein D | VFG2047 | Protein | 0.0 | 99 |
