Gene Information

Name : gspH (G2583_3682)
Accession : YP_003501157.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : general secretion pathway protein H
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3729033 - 3729596 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence :
GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA
GACGTTTGCGACCGATTCTGAATCGCCCGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAAGACA
GGGCAGTGATCGAAGGGCAGACACTCGGTGTACTAATCGACCCGCCGGGATACCAGTTTATGCAGCGTCGTCAGGGGCAG
TGGTTGCCCGTTTCTGCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAG
TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGTTGCAAA
AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCA
GCGGCGCAAAACGCATGTTGGGCGGTAAAACTGGCACACGATGGCGCGTTATCCCTCAGTCAATGTGATGAGAGGATGCC
ATGA

Protein sequence :
MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQ
WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
AAQNACWAVKLAHDGALSLSQCDERMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspH CAE85230.1 GspH, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-79 99
gspH YP_854403.1 type II secretion protein GspH Not tested PAI I APEC-O1 Protein 2e-84 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspH YP_003501157.1 general secretion pathway protein H VFG2051 Protein 4e-79 98