Gene Information

Name : gspJ (G2583_3680)
Accession : YP_003501155.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : general secretion pathway protein GspJ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4795
EC number : -
Position : 3728063 - 3728632 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence :
ATGCTGGTGGCGATAGCCATTTTTGCCTCACTGGCACTGATGGCGCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAG
TGCCGTCGCCGATCACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTCTGACCCACGATCTGACCCAAATGA
TGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGAGAACCAGCGTTACTGGCTGGCGCTGGCGTGCTGGCGTCTGAGAGT
GAAGGAATGCGCTTTGTACGCGGCGGCGTGGTTAATCCGTTGATGCGTCTGCCACGCAGCAATCTGCTCACCGTCGGTTA
CCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCACTGACCGATGCCGCAGGCAGCGTGAAGCCGACAATGCAAA
AGTTGATTCCGGCCGATTCGCTCCGTTTGCAGTTCTATGATGGTACGCGCTGGCAGGAGAACTGGTCGTCAGTACAGGCG
ATCCCTGTGGCGGTGCGCATGACCCTGCATTCGCCGCAATGGGGCGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCA
ATTATCATGA

Protein sequence :
MLVAIAIFASLALMAQQVTNGVTRVNSAVADHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASES
EGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQENWSSVQA
IPVAVRMTLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-83 97
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 3e-83 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_003501155.1 general secretion pathway protein GspJ VFG2053 Protein 3e-85 98