Gene Information

Name : G2583_0351 (G2583_0351)
Accession : YP_003497974.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Unknown
Product : Integrase for prophage CP-933I
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 351744 - 352976 bp
Length : 1233 bp
Strand : +
Note : -

DNA sequence :
ATGTGTATAGGATTGTGTATATGTTCCTGTTCGGTCTGGATTCCTATACACATGCCTTTAAACGATATGCAGATTCGCCG
CGCTAAGCCTGAAGCTAAAGCCTATACACTTGGAGATGGGCTAGGGTTGTCATTACTTATAGAACCTAATGGAAGCAAGA
GTTGGCGGTTCCGCTATCGCTATGCCGGCAAACCCAAAATGATCTCGCTTGGTGTTTACCCAACGATCACCCTTGCCGAT
GCTCGTTCCCGTCGTGATGAAGCTCGAAAACTTGTGGCAGAAGGAAAGAACCCTAGTGAGGTTCGAAAAGAGCAAAAGCT
AGCTATGCAAACAGAGTCAGAGAACGCCTTCGAAAAGATAGCCAGAGAGTGGCATCAACTTAAATCTGCTAAATGGTCGG
CGGGATATGCATCAGATATCATGGAAGCGTTTAAGAACGACATTTTTCCTTATGTCGGAACAAGGCCTGTGGGAGAGATT
AAACCGCTAGAGCTGCTGAACGTTCTGCGTAAAATTGAGAAACGTGGTGCGTTGGAGAAAATGCGCAAAGTGCGGCAGCG
TTGCTCCGAAGTGTTTCGCTACGCAATTGCAACGGGTAGGGCGGAGTACAATCCTGCGGCTGATCTCTCCAGCGCTCTCG
AAGTACACCAATCCAATCATTTCCCATTCCTAAAAGCTGATGAGATACCTGATTTTCTACGTGCCTTAGAGGGTTACTCC
GGGAGTAAGCTTGTCCAGATAGCCACGAAATTACTGATGATTACGGGTGTGAGAACCATCGAATTACGCGCGGCATTATG
GCAAGAATTTGATCTGGATAACGCTATTTGGGAAATTCCTGCTGAAAGGATGAAAATGCGTAGGCCACATCTTGTGCCCT
TATCATCTCAAGCGGTAGATTTACTCAATGAGCTCAAGATCATGACAGGGAACTATCGTTATGTTTTTCCAGGGCGGAAC
GATCCGAATAGGCCAATGAGCGAAGCGAGTATAAATCAAGCCATTAAGCGTATTGGGTATGGAGGAAAAGTCACTGGACA
TGGTTTTCGTCATACCCTTTCTACAATCCTGCATGAGCAAGGTTTTGAGAGTGCTTGGATTGAAATCCAGTTGGCTCATG
TAGATAAAAATTCTATTAGGGGGACTTATAACCATGCTCAATATTTTAGTGGAAGGAAGTCTATGATGGACTGGTACAGT
AATTTGATATTTGAAAGACTAAAAAGGAGTTAA

Protein sequence :
MCIGLCICSCSVWIPIHMPLNDMQIRRAKPEAKAYTLGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTITLAD
ARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYASDIMEAFKNDIFPYVGTRPVGEI
KPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIATGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYS
GSKLVQIATKLLMITGVRTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFPGRN
DPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKNSIRGTYNHAQYFSGRKSMMDWYS
NLIFERLKRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 4e-125 64
int AAD44730.1 Int Not tested SHI-2 Protein 3e-125 62
aec33 AAW51716.1 Int Not tested AGI-3 Protein 2e-125 62
int CAC39282.1 integrase Not tested LPA Protein 5e-125 62
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 2e-124 62
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 3e-124 62
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 3e-124 62
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-125 61
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-125 61
int ACU09430.1 integrase Not tested LEE Protein 2e-125 61
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-125 61
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 5e-121 59
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 5e-75 42
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 5e-75 42
BJAB0715_01002 YP_008216150.1 Integrase Not tested AbaR27 Protein 1e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G2583_0351 YP_003497974.1 Integrase for prophage CP-933I VFG0598 Protein 1e-124 62
G2583_0351 YP_003497974.1 Integrase for prophage CP-933I VFG0783 Protein 1e-125 61