Gene Information

Name : G2583_3241 (G2583_3241)
Accession : YP_003500747.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3291318 - 3291971 bp
Length : 654 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCGTTACCGTGCCGGGCGTCTGATGAAATATCTGAACCTGAGCAGTTGTCAGCCCGGAAAACATCAGTACAAAAA
TGCTCGTCAGGAACATACCTGCCTGCCGAATCTGCTTGAGCGCCAGTTCGCTGTGCCCGAGCCAGATAGGGTATGGTGCG
GAGATATTACGTATATCTGGGCAGGAAATCGCTGGTGCTATCTGGCGGTCGTCATGGATCTTTTTGCCCGCAGGGTTATC
GGCTGGAGCCTGTCAGCGAATGCCGATACTGCCCTGATAAGCAGTGCCCTGCGGATGGCGTATGAGGTGCGTGGTCAGCC
GCGGGACGTCATGTTCCATAGCGACCAGGGAAGTCAATATACAGGACTGAAATATCAACAACTTCTCTGGCGTTACAGGA
TAAAGCAAAGTGTCAGCCGACGGGGAAACTGCTGGGATAACAGTCCAATGGAACGCTTCTTCCGCAGTCTGAAAACAGAA
TGGGTGCCAACCGATGGCTACACAGGCAAAGACGTGGCCCGGCAGCAAATCAGCAGTTATATTCTGAATTATTACAATAG
CGTCAGGCCTCACCATTATAACGGAGGGCTGACGCCGGAAGAGTCAGAGAACAGATATCATTTTTACTGTAAAACCGTGG
CCAGTATTACTTGA

Protein sequence :
MSRYRAGRLMKYLNLSSCQPGKHQYKNARQEHTCLPNLLERQFAVPEPDRVWCGDITYIWAGNRWCYLAVVMDLFARRVI
GWSLSANADTALISSALRMAYEVRGQPRDVMFHSDQGSQYTGLKYQQLLWRYRIKQSVSRRGNCWDNSPMERFFRSLKTE
WVPTDGYTGKDVARQQISSYILNYYNSVRPHHYNGGLTPEESENRYHFYCKTVASIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 6e-100 100
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-100 100
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-100 100
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-100 100
unnamed CAI43898.1 putative transposase Not tested LEE Protein 7e-96 95
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 7e-96 95
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 4e-96 95
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-68 65
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-68 65
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-68 65
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-68 65
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-68 65
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-68 65
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-68 65
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-68 65
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-66 63
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-66 63
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 3e-56 56
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G2583_3241 YP_003500747.1 transposase VFG0785 Protein 1e-100 100
G2583_3241 YP_003500747.1 transposase VFG1122 Protein 6e-69 65
G2583_3241 YP_003500747.1 transposase VFG1484 Protein 6e-67 63