Name : intS (G2583_2885) Accession : YP_003500406.1 Strain : Escherichia coli CB9615 Genome accession: NC_013941 Putative virulence/resistance : Unknown Product : prophage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2934174 - 2935367 bp Length : 1194 bp Strand : + Note : - DNA sequence : GTGGATAAAATAATTTTACCCACCGGATTTTTACCCATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAA ACCATACCGCCTACTCGATGGTAATGGCCTGTACCTTTATGTCCCTGTATCAGGGAAAAAGGTATGGCAGCTTCGCTACA AGATTGACGGTAAGGAGAAAATCCTGACCGTCGGAAAATATCCGCTTATGACTTTGCAAGAGGCAAGGGATAAAGCATGG ACTGCGAGGAAAGACATCTCGGTTGGCATCGATCCGGTAAAGGCGAAAAAGGCTTCGTCTAACAACAATTCCTTTAGTGC GATTTACAAGGAATGGTACGAGCATAAGAGGCAAGTCTGGTCAGCCGCCTATGCGACTGAACTTGCAAAAATGTTTGATG ACGACATTTTACCTATCATCGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGATTT GAAGATCGCGGGGCAATGGAGCGAGCCAACAAAGCACGCAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGG AAGGGCTAAATATAACCCGGCACCTGACCTTGCTGAAGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTTTACCTG CCGACCAGATCCCGGCATTCAACAAAGCACTTGCAACATTTTCAGGAAGTATCGTATCTCTCATTGCGACCAAAGTTTTA CGCTACACAGCACTAAGAACGAAAGAGCTTCGTTCCATGCAATGGAAGAACGTCGATTTTGAAAACAGGATTATCACCAT CGAGGCCAGTGTGATGAAGGGACGCAAGATTCATGTGGTTCCGATGTCGGACCAGGTTGTTGAACTTCTCACTACGCTAA GCTCCATCACTAAACCAGTATCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGTCAATCTGTGAGAACGCTGTA CTGCTTGTGATCAAACAAATCGGCTATGAAGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAA CGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTAGCACATGCCAACGGCGGATCTGTGCGTGGGATTTACAACC ATGCTCAGTATCTCGATAAGTGCAGAGAAATGATGCAGTGGTGGGCGGACTGGCTTGATGGGAAGGTGGAGTAG Protein sequence : MDKIILPTGFLPMLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAW TARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKRQVWSAAYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRF EDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVL RYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAV LLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKCREMMQWWADWLDGKVE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 3e-81 | 48 |
int | ACU09430.1 | integrase | Not tested | LEE | Protein | 3e-85 | 48 |
intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 4e-85 | 48 |
ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 4e-85 | 48 |
int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 3e-85 | 48 |
int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 1e-83 | 48 |
int | CAC39282.1 | integrase | Not tested | LPA | Protein | 7e-85 | 48 |
aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 6e-85 | 48 |
int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 4e-84 | 48 |
S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 6e-84 | 48 |
SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 6e-84 | 48 |
unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 4e-77 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
intS | YP_003500406.1 | prophage integrase | VFG0783 | Protein | 2e-85 | 48 |
intS | YP_003500406.1 | prophage integrase | VFG0598 | Protein | 2e-84 | 48 |