Gene Information

Name : yedW (G2583_2419)
Accession : YP_003499962.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : Heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2432479 - 2433261 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTTTGAGGATAGCGAAAAAGCGTCCAGGGTAACCTTACAGCAGCATTACAATTTTGTAATGAACCAGGCTGTTTC
TATGACATATGATTTATGGCATATTATTTTCATGAAGATTTTACTTATTGAAGATAATCAAAGGACCCAGGAGTGGGTAA
CGCAGGGGCTTTCCGAAGCGGGTTATGTCATTGATGCCGTTTCTGATGGCAGAGATGGGCTTTATCTTGCGCTGAAGGAT
GATTATGCATTGATCATTCTGGATATTATGCTTCCGGGTATGGATGGCTGGCAGATCTTACAAACGTTAAGAACGGCAAA
GCAAACCCCTGTTATTTGCCTTACTGCAAGGGATTCTGTCGATGACAGAGTCAGAGGGCTGGACAGTGGAGCAAATGATT
ATCTGGTAAAACCTTTTTCATTTTCTGAGTTGCTGGCAAGGGTTCGGGCACAATTAAGGCAACATCACGCTTTGAATTCA
ACATTAGAAATCAGCGGCTTAAGAATGGACTCTGTTAGTCAAAGTGTGAGCAGGGACAATATCAGTATTACACTGACGCG
CAAGGAGTTTCAGTTACTTTGGCTACTGGCCTCCAGAGCTGGCGAAATTATACCCAGAACGGTTATTGCGAGTGAAATTT
GGGGAATCAACTTTGATAGTGATACCAATACGGTGGATGTCGCCATTCGCAGGCTCCGCGCAAAAGTTGATGATCCTTTT
CCTGAAAAGCTAATTGCCACAATCCGTGGGATGGGATATTCGTTCGTAGCGGTAAAAAAATAA

Protein sequence : 
MSFEDSEKASRVTLQQHYNFVMNQAVSMTYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKD
DYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNS
TLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPF
PEKLIATIRGMGYSFVAVKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-80 77
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-82 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yedW YP_003499962.1 Heavy metal response regulator BAC0125 Protein 1e-58 57
yedW YP_003499962.1 Heavy metal response regulator BAC0197 Protein 8e-56 56
yedW YP_003499962.1 Heavy metal response regulator BAC0083 Protein 4e-54 54
yedW YP_003499962.1 Heavy metal response regulator BAC0308 Protein 6e-52 53
yedW YP_003499962.1 Heavy metal response regulator BAC0111 Protein 2e-55 52
yedW YP_003499962.1 Heavy metal response regulator BAC0638 Protein 1e-48 52
yedW YP_003499962.1 Heavy metal response regulator BAC0347 Protein 8e-50 49
yedW YP_003499962.1 Heavy metal response regulator NC_003923.1003417.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator NC_013450.8614146.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator NC_002951.3238224.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator NC_007793.3914065.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator NC_002758.1121390.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator NC_010079.5776364.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator NC_002952.2859858.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator NC_007622.3794948.p0 Protein 4e-38 42
yedW YP_003499962.1 Heavy metal response regulator AE015929.1.gene1106. Protein 4e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yedW YP_003499962.1 Heavy metal response regulator VFG0596 Protein 8e-81 77