Gene Information

Name : fimC (G2583_1869)
Accession : YP_003499426.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, chaperone PapD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1917090 - 1917809 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
ATGCATCAGATGCAAACTACGCGTACCCCCTACTCTATTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTG
CCATAGCACCGTTGCCAACGCAGCTGTCGCACTGGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTAT
TGCCTGTCACGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCTGGTGACCAAAAAGACACC
CAGTTTGTCATTACCCCACCTCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTGCGGATAATCAACGCCACTAATCA
TCAGTTACCCGGCGACCGTGAAAGCCTGTTCTGGGTTAATGTTAAAGCTATTCCTGCTATGGAAAAAGACCAGAAGAATG
AGAATACATTACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGGCCCACGAACCTGGCAATGGCACCTGAAGAA
GCGCCTGCAATGCTTCGGTTTCGTCGCAGCGGTAGCAATCTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAAC
AAATATGAAAGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTGTCGGTGGATATCCCGCATG
CTGCCACCGGGGATATCAGTTTTCAGACGATCAATGATTACGGCGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MHQMQTTRTPYSISFMATVLLLLLFACHSTVANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDT
QFVITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTNLAMAPEE
APAMLRFRRSGSNLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAATGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-66 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimC YP_003499426.1 P pilus assembly protein, chaperone PapD VFG0911 Protein 4e-67 64
fimC YP_003499426.1 P pilus assembly protein, chaperone PapD VFG1644 Protein 7e-67 64
fimC YP_003499426.1 P pilus assembly protein, chaperone PapD VFG0875 Protein 1e-70 60
fimC YP_003499426.1 P pilus assembly protein, chaperone PapD VFG0445 Protein 2e-58 49