Gene Information

Name : insF (G2583_1585)
Accession : YP_003499151.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Unknown
Product : IS911 transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1617153 - 1618199 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence : 
TTGGGTGCGCCAGCTCAGGCGAGAGCGTCAGGGGATTGCGCCCTCTGCCACACCTATTACTCCAGACCAGCAACGTATCC
GCGAACTGGAAAAGCAGGTTCGCCGCCTGGAGGAACACAATACGATATTAAAAAAGGCTACCGCGCTCTTGATGTCCGAC
TCGCTGAACGGTTCACGATAGTTGCCAGACTGAGTGACAGCCACTCAGTTGTCAGCCTCTGTTCTGCTCTGGAAATACAC
CGCAGCAGTTACCAGTACTGGCGAAAACGACGCGATACGGTTAATCCGGCGCGAGTCAGGTTGTGCAGCGAAATACGCCG
GGCGTGGAACCAAAGTAGGGGCTCTGCGGGGGCGCGCACGCTGGCTGAAATGCTGACCCAAAACGGCGTCCCGATGAGCC
GTTACCGTGCCGGGCGTCTGATGAAATATCTGAACCTGAGCAGTTGTCAGCCCGGAAAACATCAGTACAAAAATGCTCGT
CAGGAACATACCTGCCTGCCGAATCTGCTTGAGCGCCAGTTCGCTGTGCCCGAGCCAGATAGGGTATGGTGCGGAGATAT
TACGTATATCTGGGCAGGAAATCGCTGGTGCTATCTGGCGGTCGTCATGGATCTTTTTGCCCGCAGGGTTATCGGCTGGA
GCCTGTCAGCGAATGCCGATACTGCCCTGATAAGCAGTGCCCTGCGGATGGCGTATGAGGTGCGTGGTCAGCCGCGGGAC
GTCATGTTCCATAGCGACCAGGGAAGTCAATATACAGGACTGAAATATCAACAACTTCTCTGGCGTTACAGGATAAAGCA
AAGTGTCAGCCGACGGGGAAACTGCTGGGATAACAGTCCAATGGAACGCTTCTTCCGCAGTCTGAAAACAGAATGGGTGC
CAACCGATGGCTACACAGGCAAAGACGTGGCCCGGCAGCAAATCAGCAGTTATATTCTGAATTATTACAATAGCGTCAGG
CCTCACCATTATAACGGAGGGCTGACGCCGGAAGAGTCAGAGAACAGATATCATTTTTACTGTAAAACCGTGGCCAGTAT
TACTTGA

Protein sequence : 
MGAPAQARASGDCALCHTYYSRPATYPRTGKAGSPPGGTQYDIKKGYRALDVRLAERFTIVARLSDSHSVVSLCSALEIH
RSSYQYWRKRRDTVNPARVRLCSEIRRAWNQSRGSAGARTLAEMLTQNGVPMSRYRAGRLMKYLNLSSCQPGKHQYKNAR
QEHTCLPNLLERQFAVPEPDRVWCGDITYIWAGNRWCYLAVVMDLFARRVIGWSLSANADTALISSALRMAYEVRGQPRD
VMFHSDQGSQYTGLKYQQLLWRYRIKQSVSRRGNCWDNSPMERFFRSLKTEWVPTDGYTGKDVARQQISSYILNYYNSVR
PHHYNGGLTPEESENRYHFYCKTVASIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-110 95
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-85 61
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-85 61
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-85 61
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-85 61
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-85 61
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-85 61
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-85 61
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-85 61
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 2e-65 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insF YP_003499151.1 IS911 transposase orfB VFG1122 Protein 7e-86 61