Gene Information

Name : ecpD (G2583_0144)
Accession : YP_003497782.1
Strain : Escherichia coli CB9615
Genome accession: NC_013941
Putative virulence/resistance : Virulence
Product : Gram-negative pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 159832 - 160563 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
GTGCTTATGTTTCCCTTGGTTAAAAAAACGGTTAGTGCATTATTTGTGAGTACTCTGTTAGCCAGTGCACCAGCATTCGC
TGACATTATTATTTCCGGAACACGTATCATTTATAACGCTGATAAAAAAGATGTTAACGTTCGTCTGGAAAATAAAGGGA
ATCGCCCCTTACTGATTCAGAACTGGTTGGATACGGGCGATGACAATGCCGATCCCAGCCAGATCAAAGTGCCGTTTACC
GCGACCCCACCAGTTTCACGCGTGGAGCCAAAACGCGGTCAAACCGTAAAAGTGATGTATACCGGTGCAACAGCCCTGCC
GAAAGACCGTGAAAGCGTCTACTGGTTTAACGTGCTGGAAGTGCCGCCTAAGCCGAAAGATGCTGAGGCTGACAAAAACT
TGTTACAGCTGGCTTTCCGCACACGCATCAAACTCTTTTATCGCCTGAGTGGGTTACAGGGAGAACCGGCTGAAGCACCG
GCGAAAATCACCTGGAAATTAAACAACGCTCAGTTACAGGCAAATAACCCAACGCCATATTACGTGTCCTTTAATGAGGT
CAAGCTGGAAAGCGGCGGCAAAACCTACAACGTCAATTCCAGCATGGTCACGCCGTTCAGCCAGGCAAGCTTTGGCGTAA
CCGGTCTGCCAGGAAGCGTGTCATCCGGAAAAGTGGTCTTTAAAGCGATCAACGACTTTGGCGGCAACATTGATGGTTCC
GCAACATTCTAA

Protein sequence : 
MLMFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFT
ATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLAFRTRIKLFYRLSGLQGEPAEAP
AKITWKLNNAQLQANNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTGLPGSVSSGKVVFKAINDFGGNIDGS
ATF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 1e-67 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ecpD YP_003497782.1 Gram-negative pili assembly chaperone VFG0007 Protein 4e-40 42
ecpD YP_003497782.1 Gram-negative pili assembly chaperone VFG1145 Protein 3e-39 41