Gene Information

Name : DEFDS_P040 (DEFDS_P040)
Accession : YP_003497421.1
Strain :
Genome accession: NC_013940
Putative virulence/resistance : Unknown
Product : transposase, IS200 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 44844 - 45269 bp
Length : 426 bp
Strand : -
Note : IS605 family ISDdes4

DNA sequence :
ATGGAAAAGTCAAGTAAAATTAGAACTGGTAGGCATTGTGTTTTTCTTCTGCATGTGCATTTGGTCTTTGTAACTAAATA
CAGAAAGAGCGTATTTCAAAAGAAACACTTAGAAACCTTAAAGGAAATCTTCGCCAAAGTCTGTCAAGATTTTGAGGCAG
AACTGATAGAATTAAATGGAGAAAGCGACCATGTCCATTTGCTTGTAAACTATCCGCCAAAGGTGGCAGTCTCAAAACTG
GTAAATTCGCTAAAAGGTGTTTCTTCCAGAAAGCTAAAACAAATCCATCCTGAATTAAGGCAGTATTACTGGAAAAACGC
TTTATGGTCTCCAAGCTATTTTGCAGGTTCCTGTGGTGGAGCTCCGCTTGAGGTTATCAAACAATATATTGAAACCCAGA
AGACACCCACTACATCACCTACCTAA

Protein sequence :
MEKSSKIRTGRHCVFLLHVHLVFVTKYRKSVFQKKHLETLKEIFAKVCQDFEAELIELNGESDHVHLLVNYPPKVAVSKL
VNSLKGVSSRKLKQIHPELRQYYWKNALWSPSYFAGSCGGAPLEVIKQYIETQKTPTTSPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAR03856.1 transposase A-like protien Not tested cag PAI Protein 2e-35 68
tnpB CAJ31328.1 insertion sequence IS606 transposase homolog B Not tested cag PAI Protein 3e-34 65