Gene Information

Name : DEFDS_0752 (DEFDS_0752)
Accession : YP_003495987.1
Strain : Deferribacter desulfuricans SSM1
Genome accession: NC_013939
Putative virulence/resistance : Virulence
Product : two-component system, NtrC family, response regulator AtoC
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 740763 - 742055 bp
Length : 1293 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTAAAATATTGGTTGTTGATGATGATAAAAATTCTCGTGATATAATAAAACTTTCATTAGAAAACAGTTACGAAGT
TGATGTTGCTTTGAATGGTGTGCATGCTTTAGAACTTATAAGAAGTAAAAGTTATGATGTTGTAATATGTGATTATGTAA
TGAACGAAATAGATGGTATAGAAGTTCTAAAAAAACTTAGAAAAATTGGTAGTAATGCTGTATTTATTTTGATAACTGCT
TTTGGCTCAAGTGACATTGCAATTAAAGCTATACAGGAGGGTGCTTATGAATACTTGAGTAAGCCTTTTAAAATGAGTAA
ATTGAAACAAATTATACAAAATGTTGAAAAGGGGTTAAATGAAAGCAAAACATTTAATGAAACAAATAAACTTGAGAATG
ATTTTGATGATCAAGTTATTGCAGAGTCGTCCGTCTTTTTAGAGACATTGAAAGATATGGCACGAGTTGCTATTTCAGAT
GTTCCAGTTTTAATTACTGGGGAGAGCGGAGTTGGTAAAGAGATTGTTGCTAAATCTATTCACAGATACAGTAAAAGGAG
TAAATATCCTTTTGTAGCTGTTAACTGTAATGCAATTCCTGGTTCTTTATTGGAATCAGAGCTTTTTGGTTATGAAAAAG
GTGCTTTTACTGGTGCTGATAAAGGGAAACCTGGTTATTTTGAGCAAGCTCAAAAAGGGACACTTTTTTTGGATGAGATA
GGAGATTTAGAGTTTGATTTACAGGTTAAATTATTAAGAGTCTTGCAAGAGCAAAGCATTAGAAGAGTTGGTGGAATAAA
GGATATAAAGCTTGATGTTAGGTTTATATTTGCAACCAATGTTGATTTGGATAAAAAAGTTCAAGAGGGTAAGTTTAGAG
CAGATCTTTATTATAGATTAAAGGTTGCTGAAATTAGAGTACCTCCTCTGAGAGAGAGGAAAGAGGATATCATACCTTTA
GCAAACTATTTTATAAGAAAGTATAATACATTTAATCGAGAAATAAAATTGAGCAATAAAGCTGAGAAACTTTTATTGAG
ATATGATTTCCCTGGTAACGTTAGAGAGTTAGAAAATATAATTAGGGCAAGCTTAATTAAGGCAAGATATACAGGTATTA
TTTTAGATGAGGATCTAAATATTAAAGAAGAATTTGTGAAAGATACTATAACAAAAGAAGATATTTTGCAGGTATTGGAA
AAAACAAGAAATAATCGTAAAAAAGCTGCAGAATTATTGGGAGTTAGTAGAGCAACGTTTTATAGATTGTTAAGAAGATA
TAATATAGATTAG

Protein sequence : 
MLKILVVDDDKNSRDIIKLSLENSYEVDVALNGVHALELIRSKSYDVVICDYVMNEIDGIEVLKKLRKIGSNAVFILITA
FGSSDIAIKAIQEGAYEYLSKPFKMSKLKQIIQNVEKGLNESKTFNETNKLENDFDDQVIAESSVFLETLKDMARVAISD
VPVLITGESGVGKEIVAKSIHRYSKRSKYPFVAVNCNAIPGSLLESELFGYEKGAFTGADKGKPGYFEQAQKGTLFLDEI
GDLEFDLQVKLLRVLQEQSIRRVGGIKDIKLDVRFIFATNVDLDKKVQEGKFRADLYYRLKVAEIRVPPLRERKEDIIPL
ANYFIRKYNTFNREIKLSNKAEKLLLRYDFPGNVRELENIIRASLIKARYTGIILDEDLNIKEEFVKDTITKEDILQVLE
KTRNNRKKAAELLGVSRATFYRLLRRYNID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-60 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-60 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DEFDS_0752 YP_003495987.1 two-component system, NtrC family, response regulator AtoC BAC0467 Protein 3e-74 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DEFDS_0752 YP_003495987.1 two-component system, NtrC family, response regulator AtoC VFG1249 Protein 7e-59 41