Gene Information

Name : fliI (DEFDS_0525)
Accession : YP_003495775.1
Strain : Deferribacter desulfuricans SSM1
Genome accession: NC_013939
Putative virulence/resistance : Virulence
Product : flagellar-specific ATP synthase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 500746 - 502056 bp
Length : 1311 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAATTGAAACTTCTTAAAAATATAAATTTTGATAATTCTGTTGTTGTCACTGGTAAAGTTACAAAGATTGTAGG
CCTTACTATTGAAGCAGATGGCCCTTTATTAAGTATTGGTACAAGGTGTGAAATTGAGGGTGTTGGTGGGAAAAATATTT
TAGCTGAGATTGTTGGATTTAAAGATGATAGAGTTATTTTGATGCCCTATGCAGAAAGTGAAGGTATTGCTCCTGGAAGT
ATTGTTAGAAATGTAGCCTATGGGAATGTGGTAAAAGTAAGTGAAGAATTATTGGGTAGGGTTTTGGATGGTTTGGGAAG
GCCGATAGATAGTAATAGAGTGATTACAAATTATGAATTAAAAAGTGTTTATACAGAGCCACCTTCCCCTTTGGAGAGGG
AAATTATAAAAGATGCAATTCATACAGGTGTTAAAGCTATTGATGCTTTAATTACTATTGGTAAAGGGCAGAGGGTTGGT
ATTTTTGCTGGAAGTGGTGTAGGAAAAAGTGTATTGCTTGGGATGATTGCAAGAAATAGTAGTGCGGATGTAAATGTTAT
TGCATTAATAGGTGAAAGAGGAAGAGAGGTTAGGGAGTTTATAGAAAGGGATCTTGGAGAGGAGGGGCTCAAAAAATCGG
TTGTAGTTGTTGCAACAAGTGATCAATCCCCTCTTGTGCGAAAAATGGGGGCTTTTGTGGCAACAACAATTGCAGAATAT
TTTAGAAGTCTTGGCAAAGATGTGATGTTTATGATGGATTCTGTTACAAGATTTGCTATGGCTCAAAGAGAAATTGGATT
GACTGTAGGTGAGCCTCCGACAACCAAAGGTTATACCCCGTCAGTTTTTGCTTTATTGCCAAAGTTACTTGAGCGAGCTG
GGACAAAAAAAGGGGAAGGGACAATAACCGGTCTATACACAGTTTTGGTTGAAGGTGACGATCTCAATGATCCTATTGCA
GATTCTGTAAGGTCTATTATAGATGGTCACATCGTACTTGATAGAAATTTGGCTGCTAAAAATCACTTTCCAGCAATTGA
TGTGATGATGAGTGCTAGTAGATTAATGAAAGAAATAGTAGATGAGAGGCATTTTGAAGCTGCCGGAAGACTTAGAGATT
TGATAGCAACATATAGAGAAGCTGAAGATTTGATAAATATTGGAGCTTATGTAAAAGGGAGCAATAAAAAGATTGATGAA
GCTATTTTAAAGATAGATTTGATTAACAACTTTTTGAAACAGAAAATAGATGAAACATCTCCTTTTGAAGAGACAAAAAA
ACAGCTTTTTCAATTAGCTGGGGTCAAATAA

Protein sequence :
MKKLKLLKNINFDNSVVVTGKVTKIVGLTIEADGPLLSIGTRCEIEGVGGKNILAEIVGFKDDRVILMPYAESEGIAPGS
IVRNVAYGNVVKVSEELLGRVLDGLGRPIDSNRVITNYELKSVYTEPPSPLEREIIKDAIHTGVKAIDALITIGKGQRVG
IFAGSGVGKSVLLGMIARNSSADVNVIALIGERGREVREFIERDLGEEGLKKSVVVVATSDQSPLVRKMGAFVATTIAEY
FRSLGKDVMFMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFALLPKLLERAGTKKGEGTITGLYTVLVEGDDLNDPIA
DSVRSIIDGHIVLDRNLAAKNHFPAIDVMMSASRLMKEIVDERHFEAAGRLRDLIATYREAEDLINIGAYVKGSNKKIDE
AILKIDLINNFLKQKIDETSPFEETKKQLFQLAGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-92 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-92 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-92 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-92 53
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-92 53
lscN AAO18044.1 LscN Virulence TTSS locus Protein 8e-96 53
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-91 53
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-91 53
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-89 52
escN AAC38383.1 EscN Virulence LEE Protein 9e-91 52
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-90 52
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-90 52
escN AAC31513.1 L0034 Virulence LEE Protein 3e-90 52
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-90 52
escN AAK26715.1 EscN Virulence LEE Protein 9e-89 51
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-89 51
escN AAL57542.1 EscN Virulence LEE Protein 9e-89 51
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 6e-89 51
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-89 51
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-89 51
escN YP_003236088.1 translocator EscN Virulence LEE Protein 7e-90 51
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-88 50
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-88 50
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-85 50
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-85 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-79 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-79 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-79 49
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-86 48
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 9e-86 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-78 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-78 48
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-76 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-76 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-73 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 7e-76 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 7e-76 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-77 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-77 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 4e-78 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 8e-77 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 8e-77 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-82 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 5e-66 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG0390 Protein 7e-97 55
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG2144 Protein 4e-99 54
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG0048 Protein 5e-100 54
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG0192 Protein 8e-100 52
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG0812 Protein 2e-90 52
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG0730 Protein 5e-91 52
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG2499 Protein 2e-91 50
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG2331 Protein 8e-86 49
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG0515 Protein 4e-79 49
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG1254 Protein 6e-94 48
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG2459 Protein 5e-70 43
fliI YP_003495775.1 flagellar-specific ATP synthase FliI VFG1008 Protein 9e-69 43