Gene Information

Name : DEFDS_0472 (DEFDS_0472)
Accession : YP_003495722.1
Strain : Deferribacter desulfuricans SSM1
Genome accession: NC_013939
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 454707 - 455354 bp
Length : 648 bp
Strand : +
Note : TC 3.A.1. The ATP-binding Cassette (ABC) Superfamily

DNA sequence : 
ATGTTGTTAGAAGCCAAAAATCTATCTAAAACCTTTAAAAAAGGTGATTATTTTATAAAGGTCTTGGATAATTTTAACTT
TGAAGTGGATAAAGGTGATTTTATAGCAATTGTAGGCCCTTCTGGAGCTGGGAAATCTACACTTTTGCATATCCTTGGTG
GTTTAGAAAAACCTGATAACGGGTTTGTTTTATTAAATGGTGAAAATATATATAAAGATGAAAAAGAGCTTGATAATATT
AGAAATCAGTATTTTGGGTTTGTTTTTCAATTTCATTATCTTTTGGACGATTTTACCGCAATAGAGAATGTAGCTTTGCC
TGCTATGATAACTGGTAAAAAAGATGAAGCTTTTAATAAGGCAAAAGCTATATTGGAGAAAATGGGTTTAATTAATAGAT
TAAATCATTTCCCAAATGAGCTATCAGGTGGAGAACAACAAAGAGTTGCCATAGCAAGAGCTTTGATAAATGATCCACTG
ATAATATTTGCTGATGAGCCCACAGGGAATTTAGATAAAGAAAATAGTAAAATTGTTATTGATGAGTTTAAAAGATTGAA
TGAGCAAGGGATAACCATTTTGATGGTTACACATGACGAGCATATTGCCTCTCAGGCAAAGAAAATTTTGCGATTAGAAA
AAGCATAA

Protein sequence : 
MLLEAKNLSKTFKKGDYFIKVLDNFNFEVDKGDFIAIVGPSGAGKSTLLHILGGLEKPDNGFVLLNGENIYKDEKELDNI
RNQYFGFVFQFHYLLDDFTAIENVALPAMITGKKDEAFNKAKAILEKMGLINRLNHFPNELSGGEQQRVAIARALINDPL
IIFADEPTGNLDKENSKIVIDEFKRLNEQGITILMVTHDEHIASQAKKILRLEKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-38 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DEFDS_0472 YP_003495722.1 lipoprotein-releasing system ATP-binding protein NC_012469.1.7686878. Protein 5e-38 46
DEFDS_0472 YP_003495722.1 lipoprotein-releasing system ATP-binding protein NC_012469.1.7685735. Protein 3e-32 42
DEFDS_0472 YP_003495722.1 lipoprotein-releasing system ATP-binding protein CP001581.1.gene598.p Protein 7e-34 41
DEFDS_0472 YP_003495722.1 lipoprotein-releasing system ATP-binding protein CP001581.1.gene798.p Protein 2e-32 41