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Name : DEFDS_0339 (DEFDS_0339) Accession : YP_003495596.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 337406 - 338686 bp Length : 1281 bp Strand : + Note : lipopolysaccharide biosynthesis protein DNA sequence : ATGAAAATAGCGGTGATTGGTTTAGGGTATGTGGGGCTACCTTTGGCAGTAGCTTTTGCAAAAGAGTTTGATGTGATAGG TTTTGATATAAAAAGAGAAAGGGTAGATGAGCTTAAAAACGGTATAGACTCTACAGGAGAAGTTAGTAGTGAAAAATTGA AAAGTGTATCAATAAAATTCACAAATAACCCAGAAGACTTAAAAGAAGCTTATTTTTATATTGTTACTGTTCCAACCCCT ATTGATAATCATAAAAATCCTGATTTAAAACCACTGATTAAAGCGAGTGAAGTTGTTGGTAAGTATTTGAAAAAAGGTGA TTATGTTGTTTATGAATCTACAGTTTATCCTGGAGTTACTGAAGAAATATGTGTACCAATTTTGGAGCAAGAATCAGGAC TTAAATTTATAAATGATTTTAAAGTAGGTTATTCCCCTGAGCGTATAAATCCTGGTGATAAAATTCATACTTTTGAAAAT ATAATTAAAGTTGTTTCAGGTTGCGATAAAGAGAGTCTTGAAAGAATAGCGGAGGTCTATGGCAAGGTTGTTAAAGCAGG TATTTACAAAGCTGAAAGTATAAAAGTAGCTGAAGCTGCAAAAGTGATAGAAAATACCCAAAGGGATTTAAACATCGCAC TGATGAACGAGTTAGCGCTCATCTTTGATAAAATGAATATAGATACTAAAAATGTTCTTGAGGCGGCTGGAACAAAATGG AATTTTTTAAAGTTTGAGCCCGGTCTTGTGGGTGGTCATTGTATAGGTGTTGACCCATACTATTTAACCTTTAAAGCACA AGAAATTGGTTATCATCCTCAGGTAATTTTAGCTGGGAGAAAGATTAATGATTATATGGGAAAATTTATTGCTGAAAAAA CTGTTAAGCTTTTGATTAAAAATGATAAGCTTGTTAAAAACGCTAAAATCCTTATTTTAGGTTTTACTTTCAAAGAAAAT ATTCCTGATATTAGAAATACAAGAGTAATTGATATTTACAATGAATTAATCGAATATGGCACAAATCCTATTGTTTATGA ACCGGTGGCTTCGAAAGAGGATATTGAAAGTGAATATGAAATAAAAATGTTAGATAGTATAAATAATATTAATAAAGAGT TTGATGCAATAATTATGGCAGTTAAACATGATATATTTTTAAAAGAGTTGAAGAAAAAGGTTATTGAAAATTTACTGACA GAAAATGGTGTTTTTGTAGATGTAAAAGGTGTTATGAAAGATAAATTGAACGACGCAAGATTTACTTATTGGAGATTATA A Protein sequence : MKIAVIGLGYVGLPLAVAFAKEFDVIGFDIKRERVDELKNGIDSTGEVSSEKLKSVSIKFTNNPEDLKEAYFYIVTVPTP IDNHKNPDLKPLIKASEVVGKYLKKGDYVVYESTVYPGVTEEICVPILEQESGLKFINDFKVGYSPERINPGDKIHTFEN IIKVVSGCDKESLERIAEVYGKVVKAGIYKAESIKVAEAAKVIENTQRDLNIALMNELALIFDKMNIDTKNVLEAAGTKW NFLKFEPGLVGGHCIGVDPYYLTFKAQEIGYHPQVILAGRKINDYMGKFIAEKTVKLLIKNDKLVKNAKILILGFTFKEN IPDIRNTRVIDIYNELIEYGTNPIVYEPVASKEDIESEYEIKMLDSINNINKEFDAIIMAVKHDIFLKELKKKVIENLLT ENGVFVDVKGVMKDKLNDARFTYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-109 | 58 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-106 | 57 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-106 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DEFDS_0339 | YP_003495596.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 9e-107 | 57 |
