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Name : dnaB (DEFDS_0034) Accession : YP_003495302.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Unknown Product : replicative DNA helicase DnaB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 41079 - 42410 bp Length : 1332 bp Strand : - Note : - DNA sequence : ATGCAGAAAACTAATTTTAGAACCCCTCCTCACAACTTAGAAGCTGAGCAAGGGGTATTAGCCTCAATACTTATAGACGA AAAAGCTCTCGATAAAGTTATACACCTTTTAAATGCTGATGATTTTTATCATCCTGCTCATAAACTAATATTTTCAACAT TAATTAAATTAGCTCAAGAAAACAAACCTTTAGACATAGTAACACTGATATCTAAGCTAACAGATGAAAACAAAATTGAA GAAGCTGGTGGAATAGATTATATCAGCTCACTTACAGATATCATACCAAATGCTGCCAATGTTGGATACTATGCGACAAT AGTAAAAGATAAAGCATTACTTAGAAATTTAATCGAAATAAGTGGTAAAATAAGTTCAAAAGCATATGAATTTTCTGGTG ACATCACTGAACTATTAGATGAAACAGAAAAAGAGATTTTTAAGTTAGCAGAATATAAGTTAAAGGGTGATATTCGACCA CTTTCTGAACTTATATCCGAAAGTTTTGAGCTCTTACAAAACCTATACGAAAAAAAAGAAGATATTATAGGTATTCCATC AGGTTATACAGATCTGGATAAATTAACAAACGGTTTTCAAGACTCTGATTTAATAATTGTGGCTGGTAGACCCGGTATGG GTAAAACTGCTTTTGCTTTAAATATAGCACTAAATGCAAGCTATCGATTTGATAAATCTATTGCAATCTTTTCATTAGAG ATGTCAGCAAATCAGCTTGTCCAAAGGTTACTTGCTACTGAGGCCAAAATAGAGTCATCAAAACTCAGAAGCGGTAAACT AAACATGGAAGAGTGGAACAGACTTGCCTCAGTCGGGGGGGAATTAAATGATTTAAAACTTTTTATTGATGACACTCCAG CTATTTCTGTTATGGAACTTCGAGCAAAATGTAGAAGATTAAAAAAAGAACATGGTCTTGATATGGTGATAGTGGATTAC CTACAACTTATGTCAGGAAGTAACGTAGATTCGAGAGAGCAGCAAATATCAGAAATTTCTAGATCTTTAAAAGCTCTTGC TAAAGAGCTTAATATACCTGTCATTGCATTATCACAGCTCAATAGAAGTGTAGAAAATAGAAGTGACAAAAGACCACAAC CATCAGATCTTAGAGAATCTGGAGCAATAGAACAGGACGCTGACCTAATAATATTTTTATATAGGGATGAGGTCTATCAT AAAGATAGTAAATTTCAAGGGCTATGTGAAGTTATTGTTGCAAAACATAGAAATGGGCCTACAGGCAGTGTATATCTTGC CTTTCTTAAAGAATTTACAAGGTTTGAAAATGCAGAGCTCAGGACTGTATAG Protein sequence : MQKTNFRTPPHNLEAEQGVLASILIDEKALDKVIHLLNADDFYHPAHKLIFSTLIKLAQENKPLDIVTLISKLTDENKIE EAGGIDYISSLTDIIPNAANVGYYATIVKDKALLRNLIEISGKISSKAYEFSGDITELLDETEKEIFKLAEYKLKGDIRP LSELISESFELLQNLYEKKEDIIGIPSGYTDLDKLTNGFQDSDLIIVAGRPGMGKTAFALNIALNASYRFDKSIAIFSLE MSANQLVQRLLATEAKIESSKLRSGKLNMEEWNRLASVGGELNDLKLFIDDTPAISVMELRAKCRRLKKEHGLDMVIVDY LQLMSGSNVDSREQQISEISRSLKALAKELNIPVIALSQLNRSVENRSDKRPQPSDLRESGAIEQDADLIIFLYRDEVYH KDSKFQGLCEVIVAKHRNGPTGSVYLAFLKEFTRFENAELRTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-84 | 44 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-73 | 42 |
