Gene Information

Name : DEFDS_0305 (DEFDS_0305)
Accession : YP_003495565.1
Strain : Deferribacter desulfuricans SSM1
Genome accession: NC_013939
Putative virulence/resistance : Resistance
Product : multicopper oxidase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG2132
EC number : -
Position : 308883 - 310316 bp
Length : 1434 bp
Strand : +
Note : -

DNA sequence :
TTGAAAGGAGGAAAAGGAATGATTACAAGAAGAAGATTTAATATGGGATTGGCAGGAGCTTTACTAGTAGGTGGATTAGG
TATACCAAAAGGGTTCGCAAATGAAAAATCTGAATGGGATACTTTACCAACTCCACCTTTATTAGAAAATGAATCGAATG
AAAAAGGTTATGTGAAATATACCTTAAATGTTCAACAAGGTATGTATGAATATTTTACAGGAGTAAAAGTACCATCTTTA
GGCTACAATGGAAATATACTGGGCCCAACTCTAAAAGCTAAAAAAGGTGACATTGTGGAAATAAAAGTAAAAAATTTTCT
TAAGGAAGAAACTACAGTTCATTGGCATGGTATGGTAGTTCCTGGCGAAATGGATGGGGGACCACATCAAGTTGTTTCTC
CAAATGGTAGTGAATGGACTGCAAGATTCAAAGTAGAGCAACAAGCAGCAACACTGTGGTATCATCCCCATGGAATTGGG
ACTACTGCTTCTCAGGTTTATGGTGGCCTTGGTGGATTGTTTATAGTAGAGGATGAAAATAGGTTGAATTTACCAAATGA
ATATGGTGTAGATGATATTCCTTTGGTGATTCAAGATAAAAGATTTTCACAAAAAGGTGATCTTCTTTATTTGACCAACA
TGAATGATATTATGTATGGAATGTTGGGTAATAAAGTTTTGGTAAATGGTGTGATTGAACCTAAAAAGACAATTCCAAGA
GGTAAAGTTAGATTTAGAATTTTAAATGCTTCTAATGCAAGAAGCTATAACTTAAAGTTCAATAACAAGTTACCATTTGT
AATAATTGCTTCAGATGGCGGTTTATTAGAAAAACCTATAAAAGTGAATGATGTTTTACTATCACCAGGGGAAAGAGTGG
AAATAGTAGCTGATTTTTCTGAATTTGATGAAGGTAGTGAAATCTTATTTGGTGATAGAGGATACAACTTTCTAACTTTA
AAGGTGGGGAAAAAAGGGAAAAGGTATGAAATTCCTACCAGGTTGATTGATATAGATAAGATATCTGAGAAGGATGTTGT
AAGAGTAAGAGAGTTTGTATTAAGCGGTCTGGGACATATGGTGACTATTAATGGTAAACAATTTCAAATGAATAGAATTG
ATGAAAACACTAAGATTGGTACAACTGAGATTTGGAGAGTTTCTGTTAGAATGGGAATGCATGGGATGATGGGTGGAGGT
AGAAATTCAATAATTCACAACTTTCATGCTCATGGTGTACTTTTTCAAGTTTTAAAAAGAAATGGAAGGAAGCCTACAGG
GCATGAACAGGGTTGGAAAGATACAATCGCTTTAAGAAATGGTGATACTGTGGATTTGATAATGAACTTCAGGAAAAAGG
GTGTTTTTATGTATCATTGCCATATACTTGAACATGAGGATAACGGTATGATGGGTCAATTTTTAGTAAGTTAG

Protein sequence :
MKGGKGMITRRRFNMGLAGALLVGGLGIPKGFANEKSEWDTLPTPPLLENESNEKGYVKYTLNVQQGMYEYFTGVKVPSL
GYNGNILGPTLKAKKGDIVEIKVKNFLKEETTVHWHGMVVPGEMDGGPHQVVSPNGSEWTARFKVEQQAATLWYHPHGIG
TTASQVYGGLGGLFIVEDENRLNLPNEYGVDDIPLVIQDKRFSQKGDLLYLTNMNDIMYGMLGNKVLVNGVIEPKKTIPR
GKVRFRILNASNARSYNLKFNNKLPFVIIASDGGLLEKPIKVNDVLLSPGERVEIVADFSEFDEGSEILFGDRGYNFLTL
KVGKKGKRYEIPTRLIDIDKISEKDVVRVREFVLSGLGHMVTINGKQFQMNRIDENTKIGTTEIWRVSVRMGMHGMMGGG
RNSIIHNFHAHGVLFQVLKRNGRKPTGHEQGWKDTIALRNGDTVDLIMNFRKKGVFMYHCHILEHEDNGMMGQFLVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0106 YP_252021.1 hypothetical protein Not tested SCCmec Protein 4e-79 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DEFDS_0305 YP_003495565.1 multicopper oxidase BAC0205 Protein 8e-83 44