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Name : clpC (DEFDS_2127) Accession : YP_003497330.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2168131 - 2170530 bp Length : 2400 bp Strand : - Note : - DNA sequence : ATGTTTGAATATTTTTCAGAGAGAGCAAGAAGAGTTATTTTATATTCAAGAGAAGAAGCTGAAAAGTTGATGAATACCCA TATAGACACGGAACATCTGCTTATTGGACTGTTAAAAGATAAAGGGAGCTTACCTTCTGAAATATTTCAAAGACGTGGTT TTGATACTGTTAGTTTAATTAAAGAGATAGAGAATATTACAGGTAGTAGTAAAAATTTGATGATAAAGGGGAGTATCCCT TTTAGTCCATTAGCCAGAAAGGTTTTAGAATATGCTGTGGAAGAAGCCAATCTTTTAAATCATAAGTATATAAACCCTGA GCACATCTTATTGGGGTTAATGAAAGAACACAGGGGAAAAGCTTTTACCATTTTGAAAAAGTTAGGTTTTGATATAGTAA CTCTTAGAGATGAGATTAAAATGATGTCTAAAAATTTCAATAAAAAAGCTCCTGTTGCTACACCAACTATAGACGAGTTT GGTAAAGATTTGACTGAAATGGCGTTAAAAAATGAGCTTGATCCCGTTATAGGTAGAGATTTAGAAATTGAAAGACTTAT TCAAATATTGGGAAGAAGGATAAAGAATAATGCTATTTTGATTGGTTTCCCTGGCGTAGGTAAGACAGCAATTGTAGAGG GGTTAGCTAAGAGGATCGCTAGTGGAGATGTACCAGAAATTTTGAAAAACAAAAGGTTGGTTTCATTAGATCTCGGTACG ATAGTTGCAGGAACAAAATATCGTGGACAGTTTGAAGAGAGGATGAAAAATATAATAAAAGAGATAGAAGCTGCTGGTAA TATAATTGTATTTATAGATGAAATACATACTATTATTGGGGCTGGAGCAGCAGAAGGGTCTATTGATGCATCAAATATGT TAAAGCCAGCTTTAGCAAGAGGGAAATTTCAATGCATTGGAGCCACAACATATAAAGAGTATAGAAAACATTTTGAAAAA GATGGTGCATTAGAAAGAAGGTTTCAAACAATTTCTGTGGAACCACCTACTTCAGAGGAAACTGTAAATATTTTAAAGGG TTTGAGAAAATATTATGAAGATTTCCATAAGGTTTTAATCCCTGATAAAGTTATTGATGAGGTTGTATATTTAACAGATA GATATATTACCGATAGGTATCAGCCAGATAAAAGTATAGATGTTATAGATGAGGCAGCTAGTAAAATTAAACTGAAAAAA CAAACATTACCTCCTGAACTCACAAAAATTAGAGATGAAATTGATAAACTAAAAGAGAAAAGGGCCAAGTTTTTTGGTAC GAGCAACTTTGCAGAAATTGAAAAATATTCTGAGCAGATAGATAAAAGGTTAAAAGATTTTAATGAAAAATATGAAGAGT GGCAGAGTAAAATAGATTTAGAGTGGCCGGTGATGACTGTAGATGATGTGGCTGAGGTTGTTTCGGGTATTTCTGGAATC CCTGTGCAAAAGTTGAAGGAGGAGGATTCAGAAAAAGCAGCGATTATCGATAAGGTTTTGAAAAAGTATATTGTTGGTCA AGATGAAGCAGTTGATCTTGTGGCAAAATCTATTAAACGCAGTTTCGCAGGTCTAAATAATCCAAACAAGCCTTTGGGTT CATTTATATTTTTGGGGCCCACTGGTGTTGGGAAAACAGAGCTTTCCAAGAGATTGGCGGAAACTATTTTTGGCTCTAAA GATGCTCTTATCAGAATTGATATGAGTGAATATATGGAGAAATTCAATGTCTCAAGGCTTATTGGGGCTCCTCCTGGATA TGTGGGGTATGATGAAGGTGGCAAGCTTACTGAAGAAGTAAGAAGGAAACCTTACTCTGTTGTTCTCTTTGATGAAATAG AGAAAGCTCACCCAGATGTGATGAATATATTATTACAAATATTGGATGAAGGGTTTGTCACAGATAGTCATGGATATAAA GTAAATTTTAAAAATACGATAATAATAATGACGTCTAATCTCGGGACAAAAAGTTCAATAGTAAATAAAAAGTTAGGGTT CGGCGGGGATGATAACACTTATTTAGATTATGAATCATTTAAAAAGAACTCATTAAAAGAGCTTCAAGATAGATTCCCTC CTGAGTTTATTAATAGAGTTGATGAAGTTATAGTTTTTAGACCACTTTCTAAAGAGGAGCTGTTTAAAATAATCGATATT CAGGTTGATGAGATAAATGAGAGATTGGATAAAATTGGTAAGAAAATAACTGTTACGGATGAAGCAAAAGAGATTTTATT GAGTAAAGATTACAATTATATGTATGGCGCAAGGCCAATAAGGAGAATTTTACAAAAATATATTGAAGATTCTTTGAGTG ATTTGTTATTACAGGGTAAATTTAAAAGGAGAAAAAATCTAAAGGTGATTGCTAAAGATGGAGAACTTGTATTTAAATAA Protein sequence : MFEYFSERARRVILYSREEAEKLMNTHIDTEHLLIGLLKDKGSLPSEIFQRRGFDTVSLIKEIENITGSSKNLMIKGSIP FSPLARKVLEYAVEEANLLNHKYINPEHILLGLMKEHRGKAFTILKKLGFDIVTLRDEIKMMSKNFNKKAPVATPTIDEF GKDLTEMALKNELDPVIGRDLEIERLIQILGRRIKNNAILIGFPGVGKTAIVEGLAKRIASGDVPEILKNKRLVSLDLGT IVAGTKYRGQFEERMKNIIKEIEAAGNIIVFIDEIHTIIGAGAAEGSIDASNMLKPALARGKFQCIGATTYKEYRKHFEK DGALERRFQTISVEPPTSEETVNILKGLRKYYEDFHKVLIPDKVIDEVVYLTDRYITDRYQPDKSIDVIDEAASKIKLKK QTLPPELTKIRDEIDKLKEKRAKFFGTSNFAEIEKYSEQIDKRLKDFNEKYEEWQSKIDLEWPVMTVDDVAEVVSGISGI PVQKLKEEDSEKAAIIDKVLKKYIVGQDEAVDLVAKSIKRSFAGLNNPNKPLGSFIFLGPTGVGKTELSKRLAETIFGSK DALIRIDMSEYMEKFNVSRLIGAPPGYVGYDEGGKLTEEVRRKPYSVVLFDEIEKAHPDVMNILLQILDEGFVTDSHGYK VNFKNTIIIMTSNLGTKSSIVNKKLGFGGDDNTYLDYESFKKNSLKELQDRFPPEFINRVDEVIVFRPLSKEELFKIIDI QVDEINERLDKIGKKITVTDEAKEILLSKDYNYMYGARPIRRILQKYIEDSLSDLLLQGKFKRRKNLKVIAKDGELVFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-173 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003497330.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 5e-146 | 49 |
| clpC | YP_003497330.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 48 |
