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Name : serS (DEFDS_1957) Accession : YP_003497164.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1986003 - 1987280 bp Length : 1278 bp Strand : + Note : - DNA sequence : GTGCTCGATTTAAGATTTGTTATTTCAAATATAGACCTTGTTAAAGATAAAACAGCAAAAAGAGGTTATACCGAAATTGA TTTAGATAACTTATTAATATTAGACAAAAAAAGAAGGGAAACAATTCAAAAAGTAGAAGAATTAAAAAAAGAACGTAATG AAAAATCAAAAGAGATAGGCAAACTAAAAAGGGAGAAAAAAGATTCTTCTCATTTAGAGCAAAGAGTAAAAGCTATCAAA GAAGAGATAGAAATTTTAGATAATAAGTTAAAAGAGATTGAAGAGCAAATAAATTACATTTTACTTAGAATTCCAAACCT TATAGATGATTCTGTACCTATAGGGGAAGATGAATCTGCAAATGTTTTATATAAAGAATGGGGTGCTAAAAGGGATTTCA GTTTTAACCCAAAGCCTCACTGGGATATTGCAGAAAAACTTGATATCGTAGATTTTGAAAGAGGAGTAAAATTAGCAAAA TCAAGATTTTCTCTTTATAAAGGTACTGGAGCAAAGCTCGAAAGAGCTCTTATAAATTTTATGTTGGATGTCCAAAGTGA GAATGGATATCAAGAGATCATTCCACCATTTCTTGTAAATGAAAAAACAATGACTGGCACAGGTCAGCTTCCAAAGTTTG AAGAAGAACTATTTAAATGTGAAAGGGATAACCTTTATCTTATCCCAACTGCTGAAGTTCCAGTTACTAATATTTATGCT GATGAGATTTTAAGTGAAGATGATCTTCCTCTTTATATGACTGCCTATACACCATGTTTTAGAAGAGAAGCTGGTAGTCA TGGAAAAGATGTTAGAGGGCTCATAAGACAGCATCAATTTAATAAAGTTGAACTTGTAAAAATAGTTAAACCGGAAGATT CAGATGAAGAGCTCGAAAAGTTACTTTTAGATGCAGAAAAAATATTACAACTATTAGAAATTCCATATAGGGTTATGACA CTTTGCAGTGGTGATCTAGGTTTTTCTGCTGCTAAAACTTATGATATAGAAGTATGGCTCCCAGGCCTTGGCACCTATAA AGAAATTTCTTCTTGCAGTAATTTTAAAGATTTTCAATCAAGAAGAGCAAATATTAAATTTAGAAGAAAAGATACCAAAA AGACAGAATACCCACATACGCTAAACGGTTCAGGACTTGCTGTAGGTAGAACGTTCCTTGCAATATTAGAAAATTATCAG CAAGAAGATGGTTCTGTTGTTGTTCCTGAAGTCTTAAGAAAATATATGGGTGGGATAGAAGTTATAAAGCCAGAATAG Protein sequence : MLDLRFVISNIDLVKDKTAKRGYTEIDLDNLLILDKKRRETIQKVEELKKERNEKSKEIGKLKREKKDSSHLEQRVKAIK EEIEILDNKLKEIEEQINYILLRIPNLIDDSVPIGEDESANVLYKEWGAKRDFSFNPKPHWDIAEKLDIVDFERGVKLAK SRFSLYKGTGAKLERALINFMLDVQSENGYQEIIPPFLVNEKTMTGTGQLPKFEEELFKCERDNLYLIPTAEVPVTNIYA DEILSEDDLPLYMTAYTPCFRREAGSHGKDVRGLIRQHQFNKVELVKIVKPEDSDEELEKLLLDAEKILQLLEIPYRVMT LCSGDLGFSAAKTYDIEVWLPGLGTYKEISSCSNFKDFQSRRANIKFRRKDTKKTEYPHTLNGSGLAVGRTFLAILENYQ QEDGSVVVPEVLRKYMGGIEVIKPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-100 | 55 |
