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Name : clpB (DEFDS_1925) Accession : YP_003497132.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1950954 - 1953557 bp Length : 2604 bp Strand : - Note : - DNA sequence : ATGATAAATTGGAATAAAATGACTATAAAAGCAAGTGAGGCATTGCAGAATGCCATAAAGTTGGTTGAAGATAAACAGCA ACAACAATTATTACCAGATCATATATTATATGCTTTGATCACTCAGGAAGATGGGTTGATAGTCCCTCTTTTGCAGAAAA TAGGTGTTAATATAGCATCTTTAAAAGAAGATTTGATAAAAGCTATTGATGGTTTACCAAAGGTTAGTGGTTCTGAACAA GTTTATATGTCTCAAGATGCAAAAAAAGCTATCGATTATGCTTTTGAATCGATTAAACAGTTTAAAGATGAATATGTATC AACTGAACATTTTCTTTTAGGTTTGGTTGAGCACGCAGGTTATGGTTTGAGACAGATTCTAACAAAATATGGTATAGATA GAGCAGTAGTTGAAAAAGCTATAAAAGAGATTAGAGGCTCAAGTAGGGTAACAGATCAAAATCCTGAAGAAAAAATGAAT GCTTTGGAAAAATACACCATAGATTTAACTGAAGCAGCAAGGAATGGTAAACTTGATCCAGTTATAGGTAGGGACGAGGA GATTCGTAGAGTAATACATGTTTTGTCAAGAAGGACAAAAAACAACCCAGTGTTAATTGGTGAACCTGGTGTTGGTAAAA CTGCTATTGTGGAAGGGCTTGCCCAAAGGATAGCAAATGGAGATGTGCCTGATTCTTTGAAAAATAAAAGGGTTCTTGCT CTTGATATGGGTGCTTTAATCGCAGGTACAAAGTTTAGAGGTGAGTTTGAGGAAAGGCTGAAGTCTATCTTAAAAGAGAT CAAAGAGAGTGAAGGCGAAATTATTCTCTTCATTGACGAGTTGCATACCCTTGTTGGAGCTGGTGCAGCTGAAGGTGCTA TGGATGCTGCAAATATATTAAAACCAGCGTTAGCAAGAGGTGAGCTACACTGTATTGGTGCAACGACACTAGATGAATAT AAAAAATATATAGAAAAGGATGCAGCGTTAGAAAGGAGATTCCAGCCTGTATTTGTGGATGAGCCATCAGTTGAAGATAC AATTTCAATCTTACGTGGCTTAAAAGAAAGATATGAAGTTCATCATGGTGTAAGGATAAAAGATGCAGCATTGGTCGCTG CTGCATATCTTGCGCATAAATATATAAGTGATAGGCAAATGCCAGATAAAGCAATAGACCTAATAGATGAAGCTGCTGCA AAAATTAGAATGGAGATAGACAGTTTACCAACTGAGTTAGATGAACTTGAAAGAAAATTGAGACAGCTTGAAATAGAACG TCAGGCTTTGAAAAAGGAAAAAGATGAGGCAAGTAAAAGCAGATTAGTTAAGCTTGAAGAAGAAATTAGTAACTTACAAG AAAAGATAAACGAGTTGAAAACTCATTGGCAGAATGAAAAGAATCTCATTATGGAATCCCGTAAGATAAAAGAGGAGATT GAACAGGCTAAAATAGAGATGCAAAAAGCTGAAAGAGAAGGAAATTTGGAGCTTGCTTCACAGATAAAGTATGGAAAGTT GATTGAGTTGCAACAAAAGCTTGAAGAAGTAAATAATAAGTTGAAAGAGATTCAGAAGAATAAGAAGATGCTTAAAGAAG AGGTTGATGAAGAGGATATCGCTGCAATTGTTTCGAAATGGACAGGGATACCAGTTAATAAACTCTTAGAAGAAGAAGCA GATAAACTTATTAAAATGGAAGAGTATCTACATAAGCGTGTAATCGGTCAAGATAAAGCTATAAAAGCTGTAAGTGAGGC TATCAGAAGAAGTAGAGCTGGATTGAATGATCCAAAAAGGCCTATCGGTTCATTTATTTTCCTCGGTCCAACAGGTGTGG GTAAAACTGAGCTTGCGAAAGCGTTGGCTGAATTCTTGTTTGATTCGGAAGATGCTATGATTCGTATTGATATGAGTGAA TATATGGAAAAACATGCTGTGGCTAAATTGATAGGTGCTCCTCCTGGTTATGTAGGCTATGAAGAAGGTGGCCAACTAAC CGAAAGGGTAAGAAGAAGACCATATAGTGTGATTTTGCTGGATGAGATTGAGAAAGCTCATCCTGATGTGTTTAACTTAT TGTTGCAAATACTTGATGATGGTAGGTTAACTGATTCTAAAGGTAGAACAGTAAACTTTAGAAATACTGTAATTATTATG ACTTCTAATATAGGAAGTGATTTGATACAGCAGGAGTTTGCAAAAGAAGGGAGCTGGGAGGAAAAGTATGAAAGGATTCA TAATCTGGTATTTCATCAGTTGAGCAACTACTTTAAACCAGAGTTTTTAAACAGGGTGGATGATATAATAGTATTCCATC CACTTGGAGATGAACATTTAAGAGAGATTGCTAAGCTGTTGTTAAACAATTTTGCTAAACGTTTGGCTGAGAATAATATC GAAGTTGAGTTTGACGATAGTGCTATTGATATGGTTGTTAAGGCTGGATATGATCCAAAATTTGGTGCAAGACCAATGAA AAGAGCAATTCAGAGATTGATAGAGAATAAGATAGCTGAGGAGATTATTAAAGGGAATATTAAACAGGGCGAAAAGATAA AGGTTGTTTTCCAAAATGAAGAATTAGTAATCGAAAAACTTTAA Protein sequence : MINWNKMTIKASEALQNAIKLVEDKQQQQLLPDHILYALITQEDGLIVPLLQKIGVNIASLKEDLIKAIDGLPKVSGSEQ VYMSQDAKKAIDYAFESIKQFKDEYVSTEHFLLGLVEHAGYGLRQILTKYGIDRAVVEKAIKEIRGSSRVTDQNPEEKMN ALEKYTIDLTEAARNGKLDPVIGRDEEIRRVIHVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIANGDVPDSLKNKRVLA LDMGALIAGTKFRGEFEERLKSILKEIKESEGEIILFIDELHTLVGAGAAEGAMDAANILKPALARGELHCIGATTLDEY KKYIEKDAALERRFQPVFVDEPSVEDTISILRGLKERYEVHHGVRIKDAALVAAAYLAHKYISDRQMPDKAIDLIDEAAA KIRMEIDSLPTELDELERKLRQLEIERQALKKEKDEASKSRLVKLEEEISNLQEKINELKTHWQNEKNLIMESRKIKEEI EQAKIEMQKAEREGNLELASQIKYGKLIELQQKLEEVNNKLKEIQKNKKMLKEEVDEEDIAAIVSKWTGIPVNKLLEEEA DKLIKMEEYLHKRVIGQDKAIKAVSEAIRRSRAGLNDPKRPIGSFIFLGPTGVGKTELAKALAEFLFDSEDAMIRIDMSE YMEKHAVAKLIGAPPGYVGYEEGGQLTERVRRRPYSVILLDEIEKAHPDVFNLLLQILDDGRLTDSKGRTVNFRNTVIIM TSNIGSDLIQQEFAKEGSWEEKYERIHNLVFHQLSNYFKPEFLNRVDDIIVFHPLGDEHLREIAKLLLNNFAKRLAENNI EVEFDDSAIDMVVKAGYDPKFGARPMKRAIQRLIENKIAEEIIKGNIKQGEKIKVVFQNEELVIEKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-104 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003497132.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2076 | Protein | 8e-128 | 44 |
| clpB | YP_003497132.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2084 | Protein | 9e-109 | 41 |
