Gene Information

Name : glnA (DEFDS_1474)
Accession : YP_003496690.1
Strain : Deferribacter desulfuricans SSM1
Genome accession: NC_013939
Putative virulence/resistance : Virulence
Product : glutamine synthetase type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1495197 - 1496609 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGACAGCAAAAGAAGTTTTAAAATTAATTGAAGATGAAGGAATTAAAATTGTTGATCTCAGGTTTATGGATTTTATAGG
GCTGTGGCAGCATTGCTCATATCCAGCTCATGAATTTAATGAGGATGTTTTTGAAGAAGGGCTTGGGTTTGATGGCTCAA
GTATTAGAGGTTGGCAATCAATTAATGCAAGTGATATGATTTTGATACCTGATCCATCTACAGCTAAAGTTGATCCGTTT
AGTGAAGTTCCTACATTGATAATGATATGTAATGTTTATGATCCTATAACAAAAGAGCCTTACACAAGAGATCCAAGACA
CATAGCTATAAAAGCTATAAATTATTTGAAAAGCACTGGTATAGCTGATACAGCTTACTTTGGTCCTGAAGCAGAATTTT
TTGTTTTTGACAATATTCAGTATGCTTACAATTCTAATGAGGCTTTTTTCTCTTTTGATTCCGTAGAAGGTTTTTGGAAT
ACTGGTGCAGATGAAATGCCTAATCTTGGTTATAAAATAAGACATAAAGAAGGTTATTTCCCTGTTCCACCACATGATTC
TTTAATGGATATAAGAAATGAGATGGTTATGTTAATGGAAAAAATGGGTATTGTTGTTGAAGCTCATCATCATGAGGTTG
CAACAGGTGGTCAGTGTGAAATTGATATTAAATACGCTCCACTTGTAGAGCAAGCTGACAATTTATTACTTTATAAATAT
ATCGTCAAAAATGTAGCAAGAAGACATGGTAAAGTTGCAACATTTATGCCAAAACCAATGTATGGTGATAACGGTAGTGG
TATGCACAGCCACCAGTCTTTATGGAAAGATGGACAGCCACTTTTTGCTGGTGATGAATATGCAGGTTTAAGTGAGCTCG
CATTATATTATATTGGTGGTATTATTAAGCATGCAAGAGCAATAGCTGCATTTACTAATCCAACTACAAACTCTTATAAA
AGGTTAGTTCCTGGTTTTGAAGCACCAGTTAATTTAGCTTATTCATCGAGAAATAGAAGTGCTTCCATAAGAATTCCTAT
GTATTCAGCTTCACCAAAAGCAAAAAGGATAGAGGTGAGATTCCCTGACCCATCATGCAACCCATATCTTGCTTTTACTG
CAATGCTCATGGCTGGGCTTGATGGTATTGAAAACAAGATTGATCCAGGTGAGCCAATGGATAAAAACTTGTATGATCTT
GATCCAATAGAGCTTTCAAATATTCCTCAGATGCCTGCATCTCTTGATGAGGCATTAAATGAGTTGGAAAAAGATCATGA
GTTCTTGTTGAAAGGGGATGTGTTTACTGAGGATGTTATAGCAACTTGGATAGAATATAAGAGAGAAAATGAGACATCTG
CTGTAAATAGCAGACCTCACCCATACGAGTTTATACTCTATTTTGATAATTAA

Protein sequence :
MTAKEVLKLIEDEGIKIVDLRFMDFIGLWQHCSYPAHEFNEDVFEEGLGFDGSSIRGWQSINASDMILIPDPSTAKVDPF
SEVPTLIMICNVYDPITKEPYTRDPRHIAIKAINYLKSTGIADTAYFGPEAEFFVFDNIQYAYNSNEAFFSFDSVEGFWN
TGADEMPNLGYKIRHKEGYFPVPPHDSLMDIRNEMVMLMEKMGIVVEAHHHEVATGGQCEIDIKYAPLVEQADNLLLYKY
IVKNVARRHGKVATFMPKPMYGDNGSGMHSHQSLWKDGQPLFAGDEYAGLSELALYYIGGIIKHARAIAAFTNPTTNSYK
RLVPGFEAPVNLAYSSRNRSASIRIPMYSASPKAKRIEVRFPDPSCNPYLAFTAMLMAGLDGIENKIDPGEPMDKNLYDL
DPIELSNIPQMPASLDEALNELEKDHEFLLKGDVFTEDVIATWIEYKRENETSAVNSRPHPYEFILYFDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-106 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003496690.1 glutamine synthetase type I VFG1399 Protein 2e-135 58