Gene Information

Name : DEFDS_1355 (DEFDS_1355)
Accession : YP_003496572.1
Strain : Deferribacter desulfuricans SSM1
Genome accession: NC_013939
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1364956 - 1366380 bp
Length : 1425 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAGAAAAACTAAAATAGTTGTTACTTTAGGTCCTTCCACTGAATCTGAAGAGAAGATATCTAAATTAATTGATAT
GGGGGTTGATGTTTTTAGGTTTAATTTTTCGCATGGATCTCATGAATATCATAATATGCTTTATGAGAGGGTGAGGAGAT
TATCTGCTGAAAAAGGTAGGTATGTAGCTACATTGCTTGATTTATCTGGCCCAAAAATAAGAATTGGCGTGATAAAACAA
CCTTTCCCTGTAGCAATAGGGGATAAGCTTGTTTTTAAGTTTGGTGATTTTGTTGGGGACAAAGATGGTATCCCTATTAA
TATAAAAGAAATATTTGATGCAGTTAAGGTAGGTAACAATGTTTATTTAGCAGATGGGACTATTAAGTTGAGAGTACTGG
AAACAAACAAAGATAGTTTTGTTGTAAAGGTATTGACGCCAGGTATTGTTTCTTCAAAAAAAGGTGTAAATTTGCCGGAT
TCAAAATTAAATATATCTTCGATAACTGATAAAGATATTGAAGATATTAGGTTTGGGATAGAAAAAGGGTTTGATTTTAT
TGCATTATCCTTTGTTAAAAGTAGAGATGATGTATTAAAAGCAAAAGATATTATTCATGAATATGGTGGTGATATCCCTG
TATTTGCAAAAATAGAGAAGTTTGATGCTGTGGAAAATATCGATGAAATTGTTGAAATTAGTGATGGTATCATGGTTGCT
CGTGGTGATCTTGGGATAGAGATTGATATGGAAAAAGTTCCGGTTGTGCAAAAAATGATTATCAATAAAGCTAATGAAGC
AGCAAAACCAGTAATTACTGCCACCCAAATGCTTACAACTATGGTGAAGCATTCAAGACCTACAAGAGCAGAAGTTTCTG
ATATAGCAAATGCTGTGTTGGATGGTACAGATGCAGTAATGTTGTCTGATGAAACTACCGTAGGGGAATATCCATTAGAA
GCGGTCAATGTGATGGTAAAAACTATAATTGAGGCTGAGAAAATTTATAATTTCAACAGATTTTATAGCTATCACGAAAA
AGGGAAAATTAGTAGTGCGCTTGCTGAAACTGCAGTTAGACTTTCATCAGAGTTGATAGCTGATGGGATAGTAGTTTTTA
CAAAAAGTGGGTCAAGTGCCAGAAGGGTTTCAAGGTCTAAACCAAAAGCTCCAATTTTTGCTGTAGCTACCGAAGATAAA
GTGCTAAGAAGACTTGCTGTTTCATGGGGTGTAATACCTTATTCAAAAACTAAAGATACGACGGATTCAGATGAGCTTTT
AAAAGAGTTTTTAATTAAGTCTAAAGATGATTTTGGAACTGAAAATGTATATATTGCTACAATAGGGCATCCAGCGGGGG
TTCCTGGTTCAACAAATGTGATTAGAACTATTAGAAAGCAGGATTATGAGTTTTTCTTAAAATAA

Protein sequence :
MFRKTKIVVTLGPSTESEEKISKLIDMGVDVFRFNFSHGSHEYHNMLYERVRRLSAEKGRYVATLLDLSGPKIRIGVIKQ
PFPVAIGDKLVFKFGDFVGDKDGIPINIKEIFDAVKVGNNVYLADGTIKLRVLETNKDSFVVKVLTPGIVSSKKGVNLPD
SKLNISSITDKDIEDIRFGIEKGFDFIALSFVKSRDDVLKAKDIIHEYGGDIPVFAKIEKFDAVENIDEIVEISDGIMVA
RGDLGIEIDMEKVPVVQKMIINKANEAAKPVITATQMLTTMVKHSRPTRAEVSDIANAVLDGTDAVMLSDETTVGEYPLE
AVNVMVKTIIEAEKIYNFNRFYSYHEKGKISSALAETAVRLSSELIADGIVVFTKSGSSARRVSRSKPKAPIFAVATEDK
VLRRLAVSWGVIPYSKTKDTTDSDELLKEFLIKSKDDFGTENVYIATIGHPAGVPGSTNVIRTIRKQDYEFFLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-69 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-69 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-69 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DEFDS_1355 YP_003496572.1 pyruvate kinase VFG0479 Protein 1e-69 41