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Name : lysS (DEFDS_1155) Accession : YP_003496380.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1153591 - 1155057 bp Length : 1467 bp Strand : - Note : - DNA sequence : ATGGACAATCATCGTTTTGAAAAATTAAATGAGTTAAAACAGATGGGGATAAACCCATACATCAGCTCTTTTAAAGTTAC TAATAAAATTTCTGATATAAAAAAGGCATATATAAACACATCTTCTGCTGAGCTTTTGGATAAAAAATATAGAGTTACTG TTGCTGGACGTGTAATGGCAATTAGAGAGTTTGGGAAGGCAGCGTTTCTAAATATAAAAGACAGAAGTGGAAGTATCCAA GTTTATATTGCAAAAAAAGAGTTAAGTGAACAGGAATATGAAATTTTCAAAAAAACAGATATAGGAGATTTTATTGGAGT TTCAGGATATCTCTTTAAAACCAAGACAGGTGAGCTCACTGTTTTGGCCGAAACCTATAAAATACTTACAAAGGCTTTGA GAGACCTGCCTGAAAAATGGCATGGTTTAAAAGATGTAGAAAAGAGATACAGACAAAGATATGTTGATTTAATAGTAAAT GATGAAATTAGAGAACTTTTTATTTTAAGGAGTAAAATAATCCAGAGGATGAGACAGTTTTTTATTGAAAATGAGTTTAT TGAAGTAGAAACACCTATGATGCAGCCTATAGCTGGTGGAGCTACTGCAAGACCTTTTATCACTCATCACAATGCATTGG ATATGACCCTTTACTTAAGAATAGCTCCTGAATTGTATCTTAAAAGGCTTGTAATTGGTGGTCTAGAAAGGGTTTTTGAA ATAAACAGAAATTTTAGAAATGAGGGTATTTCTACAAAACATAATCCAGAATTTACTATGGTAGAATGGTATATGGCCTA TGCTGATTATTATGATCAGATGGCTTTTACCGAAAATATGCTTTATACAATTGCAAAAGATGTTCTCGGTAAAACAACCA TCACTTTTGGAGAATACGAAATTGATTTAACACCACCATGGGATAAGCTGACTTTAGAAGATTCTATTGAAAAATATACA GATATTAAAAAAGATGATTTAAAAGATTTTGATAGTGCTAAACAAGTAGCAAAAAATCTTGAAATTAAGCTTGAAAAAAA CTGGGGTAGAGGCAAAATTGTATTAGAAATTTTTGAAAAAACTGTAGAACACAAATTAATTCAACCTACTTTCATAATTG ATTACCCAAAAGAGGTTTCACCTCTTGCAAAATCAAAATTTGATAATCCAGATGTTACAGAAAGATTTGAATTGTTTATT GCAGGCATGGAAGTTGCAAACGGATTTAACGAGCTAAATGATCCAATAGATCAAAAAGAGCGGTTTGAAAAGCAGGTAGA AGCAAAAGAAGCTGGTGATGAAGAAGCTCATATGATGGATCATGATTATATTAGAGCCCTTGAGTATGGCTTACCTCCTA CAGCTGGACAGGGTTTAGGAGTGGATAGGCTTGTTATGTTGTTCACAAATAAAAATTCTATTAGAGAAGTTATTCTCTTT CCACATATGAGACCAGAAGATATATGA Protein sequence : MDNHRFEKLNELKQMGINPYISSFKVTNKISDIKKAYINTSSAELLDKKYRVTVAGRVMAIREFGKAAFLNIKDRSGSIQ VYIAKKELSEQEYEIFKKTDIGDFIGVSGYLFKTKTGELTVLAETYKILTKALRDLPEKWHGLKDVEKRYRQRYVDLIVN DEIRELFILRSKIIQRMRQFFIENEFIEVETPMMQPIAGGATARPFITHHNALDMTLYLRIAPELYLKRLVIGGLERVFE INRNFRNEGISTKHNPEFTMVEWYMAYADYYDQMAFTENMLYTIAKDVLGKTTITFGEYEIDLTPPWDKLTLEDSIEKYT DIKKDDLKDFDSAKQVAKNLEIKLEKNWGRGKIVLEIFEKTVEHKLIQPTFIIDYPKEVSPLAKSKFDNPDVTERFELFI AGMEVANGFNELNDPIDQKERFEKQVEAKEAGDEEAHMMDHDYIRALEYGLPPTAGQGLGVDRLVMLFTNKNSIREVILF PHMRPEDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-117 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003496380.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-117 | 54 |
