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Name : DEFDS_1039 (DEFDS_1039) Accession : YP_003496265.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 1038430 - 1039392 bp Length : 963 bp Strand : + Note : - DNA sequence : ATGGATGTGATAGATATTGCTAAAAAAGCTCTAAAAATTGAAGCTGATGCAATTTATTCTTTAATTGAAAAATTAAATGA TGATTTTGTAAAAGCAGTAGATATTATTTACAATTGCAAAGGGAGATTAGTAGTTACTGGGATGGGCAAATCTGGTTTAA TTGGTAAAAAGATTGCTTCAACTTTTGCTTCTACAGGTACACCTTCGCTTTTTTTACATCCAGCTGAAGGTGTTCACGGT GATTTGGGTATGATTGTAAAAGGGGATGTGGTTTTAGCTATTTCCAATAGTGGAGAAACAGATGAGCTAGTTTCTATCTT ACCAATAATAAAGAGATTAGGTGTGCCTTTGATATCAATAGTGGGTAGATTAAACTCTACTTTAGCTAAAAGAAGTGACT GTGTTTTGGATGCTTCAGTGGAGAAGGAGGCCTGTCCGTTGAATTTGGCCCCCACAGCAAGCACTACTGCTGCACTTGCT TTAGGAGATGCATTAGCAGTTGCTTTACTGGAAAAAAGAGGGTTTAAAGAAGAGGATTTTGCTTTATTTCATCCATCTGG TAGTTTAGGTAAAAGATTACTCCTAAAGGTTTCTGATATATTCCATATGGGAGATAAAGTACCTGTTGTAAAAAGTGATG TGACTGTGACAGAAGCTATTTTAGAGATGAGCTCAAAAGGTTTTGGATGTACTACGATTGTTGATGACAATGGAGCTCTT ATTGGCGTTTTAACTGATGGTGATTTAAGAAGAGGGTTGGAGAAGTATAAAGATCTTTTTGAAAGAAATGTTATGGATAT TGCTTCTAAAAATCCAAAAACAATTGATGAAGATTCTTTGGCAGCCAAGGCATTACAAATAATGGAAAAATATTCTATAA CAAGCCTCATAGTAATTGATGATAAAAAAAGACCATATGGTATAGTTCATTTACATGACTTATTAAAGTCGGGGATTGTA TGA Protein sequence : MDVIDIAKKALKIEADAIYSLIEKLNDDFVKAVDIIYNCKGRLVVTGMGKSGLIGKKIASTFASTGTPSLFLHPAEGVHG DLGMIVKGDVVLAISNSGETDELVSILPIIKRLGVPLISIVGRLNSTLAKRSDCVLDASVEKEACPLNLAPTASTTAALA LGDALAVALLEKRGFKEEDFALFHPSGSLGKRLLLKVSDIFHMGDKVPVVKSDVTVTEAILEMSSKGFGCTTIVDDNGAL IGVLTDGDLRRGLEKYKDLFERNVMDIASKNPKTIDEDSLAAKALQIMEKYSITSLIVIDDKKRPYGIVHLHDLLKSGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-47 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-47 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 9e-47 | 42 |
