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Name : kdsB (DEFDS_1036) Accession : YP_003496262.1 Strain : Deferribacter desulfuricans SSM1 Genome accession: NC_013939 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1035326 - 1036054 bp Length : 729 bp Strand : + Note : - DNA sequence : ATGGCTACAGTAATAATTCCTGCAAGATATGATTCCACAAGATTACCTGGCAAACCTTTGGTTAAAATAAACGGTGTTAC TATGATAAATCGTGTTGCATCAAGATGTTTATTATCTAAAGCGGATAGAGTAATTGTTGTTACTGATGATGTTAGAATTT TAGAAGAATGTGAAAAAATTGATGGTCTTGAATGTGTTATGAGTGATAAAAATATTAAAACAGGTAGTGATAGGGTTGCA AAAGTTGCAAAGTATATAGATGATGACATAATTATTAATGTGCAAGGTGATGAACCTTTTATTGACCCAAAATTAATAAA TGATTTAATTGATAGTATGGTTGCAAATTCCGATATAAATATGATAACAGCTTGTTGTGAAATTGCAGAAGAAGAAGCTT CAGATCCTAATGTAGTAAAAGTTGTTGTGGATAAAAATAATGATGCACTTTATTTTTCAAGACAGATGATCCCTTTTGTA AGAGATGATAATAAAATAATGTATAAAAAACATATTGGGATATACGGATTTAGAAAAAATTATTTGTTTAAATTTACAGA AATGGGTGAAGGTGAATTAGAAAAATGTGAAAAACTGGAACAGTTAAGAGTTTTAGAAAATGGGGATAAAATAAGGGTTT TAATGACAGATTATAAACCTGTATGTGTAGATACTATGGAGGATGTCAAAAAAGCTGAAGAAATAGCAAAGGAGATTGAT AATGGCTAA Protein sequence : MATVIIPARYDSTRLPGKPLVKINGVTMINRVASRCLLSKADRVIVVTDDVRILEECEKIDGLECVMSDKNIKTGSDRVA KVAKYIDDDIIINVQGDEPFIDPKLINDLIDSMVANSDINMITACCEIAEEEASDPNVVKVVVDKNNDALYFSRQMIPFV RDDNKIMYKKHIGIYGFRKNYLFKFTEMGEGELEKCEKLEQLRVLENGDKIRVLMTDYKPVCVDTMEDVKKAEEIAKEID NG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-26 | 41 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-26 | 41 |
