Gene Information

Name : SCAB_9841 (SCAB_9841)
Accession : YP_003486734.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : iron transporter, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1108986 - 1109753 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGCGACTCGACATCGACGGGGTGTCGGTCGAGGCCGCGGGCGCCCGGCTGGTCGACGACATCCGGCTCACCGCCGGCAG
CGGGGCGTTCGTCGGGCTCGTCGGCCCCAACGGCAGCGGCAAGTCGACGCTGCTGCGCTGCGTCTACCGGGCGCTGCGCC
CGGCCGCCGGGGCCGTGCGGCTGGACGGCGAGGACGTGCACACCCTGCCGCCCCGGGCCGCCGCCCGGAAACTGGCGGCG
CTGCCGCAGGAGTCGTCCGCAGAGTTCGACTTCACGGTCACCGAGGTGGTCGCCATGGGGCGGCTGCCGCACCGGGACCG
GACGGCCGCCTCCGACACGGAGATCTGCGCGCGGGCCATGGCCCGCACCGGCGTGGACCACCTCGCCGACCGCGGGTTCC
CGGCCCTGTCCGGCGGCGAGAAGCAGCGCGTCCTGCTCGCCCGCGCCCTCGCCCAGCAGCCGCGGGTGCTCGTCCTCGAC
GAACCCACCAACCACCTCGACATCGCCCACCAGCTGGACGTGCTGTCCCTGGTCCGCGACAGCGGCGTCACCGTGCTCGC
CGCCCTGCACGACCTCAACCTCGCCGCCGCGCACTGCGACGTCCTGTACGTGATCGCGGACGGCCGCATCGTCGCCTCCG
GCCCGCCGCACGACGTCCTCCGACCCGAGCTGCTCGCCGAGGTGTTCGGGGTCCGCGCCCATCCGGTACGGCATCCGGTC
ACCGGAGCCGTCCAACTCCTGTTCGACCTGCTCCCGTCCACCCCTTGA

Protein sequence : 
MRLDIDGVSVEAAGARLVDDIRLTAGSGAFVGLVGPNGSGKSTLLRCVYRALRPAAGAVRLDGEDVHTLPPRAAARKLAA
LPQESSAEFDFTVTEVVAMGRLPHRDRTAASDTEICARAMARTGVDHLADRGFPALSGGEKQRVLLARALAQQPRVLVLD
EPTNHLDIAHQLDVLSLVRDSGVTVLAALHDLNLAAAHCDVLYVIADGRIVASGPPHDVLRPELLAEVFGVRAHPVRHPV
TGAVQLLFDLLPSTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-31 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-31 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-23 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-25 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-25 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-25 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_9841 YP_003486734.1 iron transporter, ATP-binding protein BAC0164 Protein 6e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_9841 YP_003486734.1 iron transporter, ATP-binding protein VFG1042 Protein 5e-31 42