Gene Information

Name : SCAB_90031 (SCAB_90031)
Accession : YP_003494460.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 10037778 - 10038545 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGCACCCCTCCCTGCCCCCTACCGCCAAGGCGAGTTACGCGGCCTGCGCCACCGACCTGACGAAGGTGTACGGCACAGG
TGACACCCGTGTGGTGGCCCTCGACGCGGTCACGGTCGGCTTCGTCCGGGGCCAGTTCACCGCGATCATGGGCCCTTCCG
GATCGGGGAAGTCCACCCTGATGCACTGCATGGCAGGTCTCGACTCGCCGTCCTTCGGGTCGGTCCGGCTCGGCGACACG
GAGATCGGCTCCCTGAACGACCGTCAGCTCACCCGGCTGCGCCGCGACCGCCTCGGCTTCGTCTTCCAGGCGTTCAACCT
GCTGCCCACCCTCACCGCCCTGGAGAACATCACCCTTCCCTTGGACATCGCGGGCCGCGGGCCGGAACGGAAATGGCTCG
AGGGCATCATCGAGACCGTCGGCCTGGCCGACCGGCTCGACCACCGGCCCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGC
GTCGCCGTCGCCCGTGCGCTGGCCGGGCGGCCCGACATCGTCTTCGCGGACGAGCCCACCGGCAATCTGGACTCCCGCAG
CGGGGCCGAGATCCTCCAGTTCCTGCGCGGCTCCACGAGCGCGCTGGGCCAGACCGTCGTCATGGTCACGCACGATCCCG
CCGCCGCCTCCTACGCCGACCGCGTCGTCTTCCTCGCCGACGGACGCATCGTCGACGAACTCCACGCGCCCACCGCCGAG
GCCGTCCTGGAGCGTATGGGACGCCTGACACCCGCGCACCAGGCCTGA

Protein sequence : 
MHPSLPPTAKASYAACATDLTKVYGTGDTRVVALDAVTVGFVRGQFTAIMGPSGSGKSTLMHCMAGLDSPSFGSVRLGDT
EIGSLNDRQLTRLRRDRLGFVFQAFNLLPTLTALENITLPLDIAGRGPERKWLEGIIETVGLADRLDHRPGQLSGGQQQR
VAVARALAGRPDIVFADEPTGNLDSRSGAEILQFLRGSTSALGQTVVMVTHDPAAASYADRVVFLADGRIVDELHAPTAE
AVLERMGRLTPAHQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_90031 YP_003494460.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-37 45
SCAB_90031 YP_003494460.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-29 44
SCAB_90031 YP_003494460.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-31 44
SCAB_90031 YP_003494460.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-28 43