Gene Information

Name : SCAB_88191 (SCAB_88191)
Accession : YP_003494278.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9832792 - 9833475 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGAACACGGTACTGGCCGGACACGGCCTCGTGAAAAAGTACGGTTCCACCCGCGCCCTCGCCGGCGTGGACGTGGAGAT
CCGTGAGCGCGACTCACTGGCGATCATGGGCCCGTCGGGATCCGGCAAGTCGACCCTGCTGCACACCCTCGCCGGGATCG
TCCGACCCGACGCCGGCCAGGTGCTGCTGGGCGGCGACCGCATCGACAATCTCGGTGAGAACAGGCTCAGTGCCCTGCGC
CGCAAGCGGTTCGGGTTCGTCTTTCAGTTCGGCCAGTTGCTGCCCGAACTGCCCGCCGAGGAGAACGCAGCCCTGCCGCT
GATGCTGGAGGGTGTACCGCGCGCCGAGGCCGTCGCCCGGGCCCGGCGGTGGTTCATGCCCCTCGGTCTGGAGGGTCTGG
AAGGCCGTCGGCCCGGTCAGCTCTCCGGCGGGCAGGCTCAACGGGTCGCCATCGCGCGCGCCCTGGCCGTCGAACCGGAC
GTGGTCTTCGCCGACGAACCGACCGGCGCCCTGGACCAGCGCACCAGCACGGAGGTGGTCCAGCTGCTGACGTTCGCGAC
CCGGCAGACCGGTGCCGCCCTGGTCATGGTCACCCACGACGCGGACGTCGCCGCCCACTGCGACCGGGTCCTCCAGGTCC
GTGACGGCCGCATCAGCGGCCACACCCAGTACACCGTCGCCTGA

Protein sequence :
MNTVLAGHGLVKKYGSTRALAGVDVEIRERDSLAIMGPSGSGKSTLLHTLAGIVRPDAGQVLLGGDRIDNLGENRLSALR
RKRFGFVFQFGQLLPELPAEENAALPLMLEGVPRAEAVARARRWFMPLGLEGLEGRRPGQLSGGQAQRVAIARALAVEPD
VVFADEPTGALDQRTSTEVVQLLTFATRQTGAALVMVTHDADVAAHCDRVLQVRDGRISGHTQYTVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-24 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_88191 YP_003494278.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-25 48
SCAB_88191 YP_003494278.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-31 42