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Name : clpB (SCAB_84631) Accession : YP_003493933.1 Strain : Streptomyces scabiei 87.22 Genome accession: NC_013929 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 9450747 - 9453386 bp Length : 2640 bp Strand : + Note : - DNA sequence : ATGGACATGAACCGACTCACCCAGAAGTCACAGGAAGCCCTCCAGGAGGCGCAGACCGCCGCCGTCCGTATGGGACAGAC CGAGGTCGACGGGGAGCATCTGCTGCTCGCGCTCCTCGACCAGGAGGACGGCCTGATCCCGCGGCTGCTGCAACAGGCGG GCAGGGAGCCCGAGGAGTTCCGTGCGGCTGTGGGTGAGGAGCTGTCCCGCCGGCCCAAGGTGACCGGCCCGGGTGCGGCG CCGGGCCAGGTGTTCGTCACCCAGCGCTTGTCCCGGCTGCTGGACGCGGCCGAGCGGGAGGCCAAACGCCTCAAGGACGA GTACGTGTCCGTGGAGCACCTCCTGCTCGCCTTGGCCGAGGAAGGCTCGGCGACCGCCGCAGGACGCCTGCTCAAGGAGC ACGGCATCACCCGGGACTCGTTCCTGAGCGCGCTCACCCAGATCCGCGGTAACCAGCGCGTCACCTCGGCCAACCCCGAA GTGGCGTACGAGGCGCTGGAGAAGTACGGCCGCGACCTGGTCGCCGAGGCCAGGAACGGCAAGCTCGACCCGGTCATCGG CCGCGACGCCGAGATCCGTCGCGTCACCCAGATCCTCAGCCGCAAGTCCAAGAACAACCCGGTCCTCATCGGCGACCCCG GCGTCGGCAAGACCGCCATCGTCGAGGGACTGGCCCAGCGCATCGTCCGCGGGGATGTGCCCGAAGGACTGCGCGACAAG ACCGTGTTCGCACTCGACATGGGTTCTCTGGTGGCCGGGGCGAAGTACCGGGGCGAGTTCGAGGAACGCCTCAAGGCCGT GCTGTCCGAGGTGAAGGCCGCCCAGGGGCACATCCTGCTCTTCGTCGACGAACTCCACACTGTCGTCGGTGCCGGCGCCG CCGAAGGGGCCATGGACGCGGGCAACATGCTCAAGCCGATGCTCGCCCGCGGCGAACTGCACATGATCGGCGCCACCACC CTCGACGAGTACCGCAAGCACATCGAGAAGGATGCCGCCCTCGAACGCCGCTTCCAACAGGTCCTGGTCGAAGAGCCGAG CGTGGAGGACACCATCTCCATCCTGCGCGGACTGCGCGAACGCCTGGAAATCTTCCACGGCGTGAAGATCCAGGACACCG CGCTGGTATCCGCGGCCACCCTCAGCCACCGCTACATCACCGACCGGTTCCTGCCCGACAAGGCCATCGACCTCGTCGAC GAGGCGTGCGCCCGGTTGCGTACCGAGATCGACTCGATGCCCGCCGAACTCGACGAGATCACCCGCCGCGTCACCCGCCT GGAGATCGAGGAGGCCGCCCTCTCCAAGGAGACCGACCCGGCCAGCAAGACCCGCCTGGAGGAGCTGCGCAGGGAACTGG CCGACCTGCGCGGCGAGGCCGACGCCAAGCACGCTCAGTGGGAGGCCGAACGGCAGGCGATCCGCCGCGTGCAGGAACTG CGCCAGGAACTGGAACAGGTCCGCCACGAGGCGGAGGAGGCAGAACGCGCCTACGACCTCAACCGCGCCGCCGAACTCCG CTACGGCCGGCTCCAGGACGTGGAACGCCGGCTGAAGTCCGAGGAGGAGCAACTGGCCGCCAAGCAGGGGCAGAACCGGC TCCTGCGCGAGGTCGTCACCGAGGAGGAGATCGCCGAGATCGTCGCCGCCTGGACCGGCGTACCCGTCGCACGCCTCCAG GAGGGCGAACGCGAGAAGCTGCTGCGCCTGGACGAGATCCTGCGCGAGCGCGTGATCGGCCAGGACGAGGCCGTTCAGCT CGTCGCCGACGCCATCATCCGCGCCCGTTCCGGCATCCGGGATCCGCGCCGCCCCATCGGCTCGTTCATCTTCCTCGGCC CGACGGGCGTCGGGAAGACCGAGCTGGCCAAGACCCTCGCGGCGGCCCTGTTCGACTCCGAGGAGAACATGGTCCGCCTC GACATGAGCGAGTACCAGGAGCGGCACACCGTCAGCCGGCTGATGGGGGCCCCGCCCGGATACGTCGGCTACGAGGAGGG CGGTCAGCTCACCGAGGCCGTACGCCGCAAGCCGTACTCGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCACACCGATG TCTTCAACACCCTGCTGCAGATCCTCGACGACGGCCGCATCACCGACGCCCAGGGCCGTACCGTCGACTTCCGCAACACC GTGATCATCATGACGTCCAACATCGGCTCCGAGCACCTCCTCGACGGCGCCACCGCCGAGGGCGAGATCAAGCCGGACTC CCGCGCCCTGGTGATGGGCGAGCTGCGCGGGCACTTCCGCCCGGAGTTCCTCAACCGCGTCGACGACATCGTGCTGTTCA AGCCGCTCGGTGAGCGGCAGATCGAGCGGATCGTGGAGCTGCAGTTCGACGAACTGCGCCGCCGCCTCGCCGAGCGCCGC ATCACCGTCGAACTCACCGACGAGGCACGTGAGTTGATCGCCCACCAGGGCTACGACCCGGTGTACGGGGCCCGGCCGCT GCGGCGTTACATCTCCCACGAGGTCGAGACGCTGGTCGGGCGCGCCCTGCTGCGCGGCGACGTGCAGGACGGCGCGAAGG TCCGCGTCGACGCCGAGCACGGCGAGCTGGTGGTGACCTACGACCAGCCCGAGGACGAGAAGGGGGCGAGGGCGGCATGA Protein sequence : MDMNRLTQKSQEALQEAQTAAVRMGQTEVDGEHLLLALLDQEDGLIPRLLQQAGREPEEFRAAVGEELSRRPKVTGPGAA PGQVFVTQRLSRLLDAAEREAKRLKDEYVSVEHLLLALAEEGSATAAGRLLKEHGITRDSFLSALTQIRGNQRVTSANPE VAYEALEKYGRDLVAEARNGKLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDK TVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGHILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMIGATT LDEYRKHIEKDAALERRFQQVLVEEPSVEDTISILRGLRERLEIFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVD EACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKETDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRRVQEL RQELEQVRHEAEEAERAYDLNRAAELRYGRLQDVERRLKSEEEQLAAKQGQNRLLREVVTEEEIAEIVAAWTGVPVARLQ EGEREKLLRLDEILRERVIGQDEAVQLVADAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEENMVRL DMSEYQERHTVSRLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNT VIIMTSNIGSEHLLDGATAEGEIKPDSRALVMGELRGHFRPEFLNRVDDIVLFKPLGERQIERIVELQFDELRRRLAERR ITVELTDEARELIAHQGYDPVYGARPLRRYISHEVETLVGRALLRGDVQDGAKVRVDAEHGELVVTYDQPEDEKGARAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003493933.1 | chaperone | VFG2076 | Protein | 6e-116 | 42 |
| clpB | YP_003493933.1 | chaperone | VFG2084 | Protein | 2e-96 | 41 |
