Gene Information

Name : SCAB_81101 (SCAB_81101)
Accession : YP_003493597.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 9001845 - 9003305 bp
Length : 1461 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGACGCAACGCAGTCGACCGAACTGCTGATCGACGGCAAGCAGGTCCCCGCCGCCGACGGCCGCACCTTCACCGT
CCTCGACCCGTCGAACGGCACGGCGATCGCCCAGGTCGCGCTGGCCGGCAAGGCCGACGTGGACGCCGCGGTGGCAGCGG
CGCGCGCCGCCTTCACGGCACCCGAGTGGGCCGGGATGCGGGCTGCCGACCGCGGCCGGATCCTGTACCGCATCGCGGAG
GCCATCCGCTTCCAGGGCGAGCGACTGGCCCGGCTGGAGAGCCAGGACGTCGGCAAGCCGCTGCGCCAGGCGAAGAACGA
CGTCGAGGCGGCGGCCCGCTACTTCGAGTTCTACGCGGGCGTCGCCGACAAGCTCGGCGGCTCGACCGTGCCGCTCGGGC
CCGGCCTGATCGACTACACCGTGCGCGAGCCGATCGGCGTCTCCGGTCAGATCATCCCGTTCAACTACCCGCTGCAGAAC
ACCGCGAGGGGCTCCGCCCCCGCGCTGGCCGCGGGCTGCACGGTGGTGCTCAAGCCCTCTCCGGAGGCACCGCTCACCCC
GCTGGAGATCGGCAGGATCGCCCTGGAGTGCGGTCTTCCGCCGGGCGTGCTGAACGTGGTCCCCGGTGACGGCGACACCG
GCGCGGCCCTCGCCGGGCACCCGGACATCGACCAGGTGACCTTCACCGGTTCGGTGCCGACCGGTATCAAGGTCGCGCAG
GCCGCCGCCGCCAACGTGGTGCCCTCCGTGACGGAGCTGGGCGGCAAGTCCCCCGTCGTCGTCTTCGCGGACGCCGACTT
CGACGCAGCGCTCGGCGCCGTCGCCGCCTCCGCCTTCGGCAACGCCGGACAGACCTGCTCGGCCGGCACCCGGCTGCTGG
TCCAGCGCGGCGCCGAGGAGTTCCTGGACAAGCTCGTCGCGCACGCAGCCTCCCTGCGCCTCGGCCCGGGTCTCACCGAT
CCGGACGTCGGCCCGCTCGTCGCCGCACGGCAGCGTGACCGGGTCCTCGCCTACCTGGAGGTGGCGAAGGCGGAGGGCGC
CGTGGCACGGACCGGCGGAGGCGCCCCCGCCGACCCCGGGCTGGCGGACGGCTACTTCGTCGAGCCGACCGTCCTGACCG
GAGTGGACAACCAGGCCCGGTGTGCCCGCGAGGAGATCTTCGGCCCCGTGGTCACGGTCATCGAGTTCGACACCGTCGAC
GAGGCCCTTCGGATCGCCAACGACAGCCCGTACGGCCTCGCCTCGTACGTGTGGACCCGCGACATCGACAAGGCGATGCG
TCTGGCCGAGGGCATCCGCGCCGGCCAGGTCTACGTCAACGCCACCGGAGTCGGCACCGGCGTCGAGCTTCCCTTCGGCG
GCTACAAACACAGCGGCTGGGGCCGGGAGAAGGGCCTCGAAGGACTGGCGAGCTACCTGCAGACCAAGAACGTCTGCATC
GGGTTCGGGAACCGGTCATGA

Protein sequence :
MSDATQSTELLIDGKQVPAADGRTFTVLDPSNGTAIAQVALAGKADVDAAVAAARAAFTAPEWAGMRAADRGRILYRIAE
AIRFQGERLARLESQDVGKPLRQAKNDVEAAARYFEFYAGVADKLGGSTVPLGPGLIDYTVREPIGVSGQIIPFNYPLQN
TARGSAPALAAGCTVVLKPSPEAPLTPLEIGRIALECGLPPGVLNVVPGDGDTGAALAGHPDIDQVTFTGSVPTGIKVAQ
AAAANVVPSVTELGGKSPVVVFADADFDAALGAVAASAFGNAGQTCSAGTRLLVQRGAEEFLDKLVAHAASLRLGPGLTD
PDVGPLVAARQRDRVLAYLEVAKAEGAVARTGGGAPADPGLADGYFVEPTVLTGVDNQARCAREEIFGPVVTVIEFDTVD
EALRIANDSPYGLASYVWTRDIDKAMRLAEGIRAGQVYVNATGVGTGVELPFGGYKHSGWGREKGLEGLASYLQTKNVCI
GFGNRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-57 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-51 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-51 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-51 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-51 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_81101 YP_003493597.1 aldehyde dehydrogenase VFG0082 Protein 7e-52 41