Gene Information

Name : pdxS (SCAB_74841)
Accession : YP_003492999.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 8277242 - 8278201 bp
Length : 960 bp
Strand : +
Note : -

DNA sequence :
TTGCAGAAACCCTTCCCCGAGCTTCCCCCGAGCGAGGTCAAACCCGTGTCCAGCACGCTCTCCAACTCCGCCCAGACCCC
CGAGACCGGCACCGCCCGCGTGAAGCGCGGCATGGCCGAGCAGCTCAAGGGTGGTGTGATCATGGACGTCGTCACCCCCG
AGCAGGCCAAGATCGCCGAGGACGCGGGCGCCGTCGCCGTCATGGCCCTGGAGCGGGTCCCTGCCGACATCCGCAAGGAC
GGCGGCGTGGCCCGGATGTCCGACCCCGACATGATCGAGGGCATCATCGAGGCCGTCTCCATCCCGGTCATGGCCAAGTC
CCGCATCGGCCACTTCGTCGAGGCCCAGGTCCTGCAGTCCCTCGGCGTGGACTACATCGACGAGTCCGAGGTCCTCACCC
CGGCCGACGAGGTCAACCACAGCGACAAGTTCGCGTTCACGACCCCGTTCGTGTGCGGCGCCACCAACCTGGGCGAGGCC
CTGCGCCGCATCGCCGAGGGCGCCGCGATGATCCGTTCCAAGGGCGAGGCCGGCACCGGCAACGTCGTCGAGGCCGTCCG
CCACCTGCGCCAGATCAAGAACGAGATCGCCCGCCTGCGCGGCTACGACAACAACGAGCTGTACGCCGCCGCCAAGGAGC
TGCGCGCCCCGTACGAGCTGGTCAAGGAGGTCGCCGAGCTGGGCAAGCTGCCGGTGGTCCTCTTCTCCGCCGGTGGCGTG
GCGACCCCCGCCGACGCCGCGCTGATGCGCCAGCTCGGCGCCGAGGGCGTCTTCGTCGGCTCCGGCATCTTCAAGTCCGG
CGACCCGGCCAAGCGCGCCGCCGCCATCGTGAAGGCCACCACCTTCTACGACGACCCGAAGATCATCGCCGACGCCTCCC
GCAACCTGGGCGAGGCCATGGTCGGCATCAACTGCGACACCCTCCCCGAGGCCGAGCGCTACGCGAACCGGGGCTGGTAA

Protein sequence :
MQKPFPELPPSEVKPVSSTLSNSAQTPETGTARVKRGMAEQLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRKD
GGVARMSDPDMIEGIIEAVSIPVMAKSRIGHFVEAQVLQSLGVDYIDESEVLTPADEVNHSDKFAFTTPFVCGATNLGEA
LRRIAEGAAMIRSKGEAGTGNVVEAVRHLRQIKNEIARLRGYDNNELYAAAKELRAPYELVKEVAELGKLPVVLFSAGGV
ATPADAALMRQLGAEGVFVGSGIFKSGDPAKRAAAIVKATTFYDDPKIIADASRNLGEAMVGINCDTLPEAERYANRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-106 78
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-106 78
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-106 78