Gene Information

Name : ctaD2 (SCAB_72121)
Accession : YP_003492738.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Unknown
Product : cytochrome C oxidase subunit 1-beta
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0843
EC number : -
Position : 7974993 - 7976723 bp
Length : 1731 bp
Strand : -
Note : -

DNA sequence :
ATGGGGACCGAGACCGCGCAGGCGGTGGCACGACCCGTCCGGGCGAGGACGCCGGGACGGCTGGCGGCCGACTGGCTGAC
CACGACCGACCACAAGAAGATCGGCCACCTCTACCTGGTCACGTCGTTCCTGTTCTTCCTGGCGGCCGGCGCGATGGCGC
TCGTCATGCGGGCCGAACTGGCCCGGCCGGGCACCCAGATCGTGGACAACGAGCAGTTCAACCAGCTGTTCACGCTGCAC
GGCACGATCATGCTGCTGCTCTTCGCGACACCGACCTTCGCCGGGTTCGCCAACGAGATCATGCCGTTGCAGATCGGCGC
GCCCGACGTCGCCTTCCCCCGGCTGAACATGCTGTCGTACTGGCTGTTCCTGTTCGGCGGGCTGATCGTGATGGGCTCGC
TGCTGGTGCCGTCCGGGCCCGCCGACTTCGGCTGGTTCGCCTACGCGCCGCTGAACGGCCTGGAACGGTCACCGGGCATC
GGGGCCGACATGTGGATCATGGGGCTGGCGCTGTCCGGGTTCGGGACGATCCTCGGCGCGGTGAACTTCCTGACCACGAT
CATCGCGATGCGCGCGCCCGGGATGACGATGTTCCGGATGCCGATCTTCACCTGGAACACGCTGTTCACGTCGATCCTGA
TCCTGATGGCGTTCCCGGTGCTGGCCGCCGCGCTCCTGGTGCTGGAGGCGGACCGGCGGTTCGGCTCGCAGGTCTTCGAC
GCGGCCAACGGCGGCGCGCTGCTGTGGCAGCACCTGTTCTGGTTCTTCGGGCACCCCGAGGTCTACATCATCGCCCTGCC
CTTCTTCGGGATCATTACGGAGATCATCCCGGTCTTCAGCCGCAAGCCGATCTTCGGCTATCTCACGCTGGTCGGGGCCA
CGATGGCGATCACCGGGCTGTCGATCGTGGTGTGGGCGCACCACATGTTCGCCACCGGCGCGGTGCTGCTGCCGTTCTTC
TCGTTCATGAGCTTCCTGATCGCCGTGCCGACGGGGGTGAAGTTCTTCAACTGGACGGGGACGATGCTGAAGGGCTCGCT
GTCCTTCGAGACACCGATGCTGTGGGCGACCGGCTTCCTGGTCTCCTTCCTGTTCGGCGGCCTGACGGGGGTGATCCTGG
CGTCGCCGCCGATGGACTTCCACGTCACCGACTCGTACTTCGTGGTCGCGCACTTCCACTACGTCGTCTTCGGCACGGTC
GTCTTCGCGACCTTCGCGGGTTTCTCGTTCTGGTGGCCCAAGTTCACCGGGAAGATGCTCGACGAACGGCTCGGCAAGAT
CCACTTCTGGACGCTGTTCGTCGGCTTCCACACCACCTTCCTGGTGCAGCACTGGCTGGGCGCCGAGGGCATGCCCCGGC
GGTACGCCGACTACCTGGCCGCCGACGGCTTCACGGCCCTGAACACGGTCTCGTCGATCGGCGCGTTCCTGCTGGGCCTG
TCCACGCTGCCGTTCCTCTACAACGTCTGGCGGACGTCCCGGTACGGGGTGCGGGTCGACGTCGACGACCCCTGGGGCTA
CGGCCGGTCACTGGAGTGGGCGACCTCGTGTCCGCCGCCGCGCCACAACTTCGTGACGCTGCCCCGGGTCCGCTCCGAGG
CGCCGGCGTTCGACCTGCACCATCCGCGGTTCGCGGCGATCACGCCGCCCCAGACGCGGAGCGGTCAGGAGCGGACGCCG
CATCCCCGGTTCGGTCAAGAGCGGCCGACAGACGGTCCCGGAGGGTCCTGA

Protein sequence :
MGTETAQAVARPVRARTPGRLAADWLTTTDHKKIGHLYLVTSFLFFLAAGAMALVMRAELARPGTQIVDNEQFNQLFTLH
GTIMLLLFATPTFAGFANEIMPLQIGAPDVAFPRLNMLSYWLFLFGGLIVMGSLLVPSGPADFGWFAYAPLNGLERSPGI
GADMWIMGLALSGFGTILGAVNFLTTIIAMRAPGMTMFRMPIFTWNTLFTSILILMAFPVLAAALLVLEADRRFGSQVFD
AANGGALLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFSRKPIFGYLTLVGATMAITGLSIVVWAHHMFATGAVLLPFF
SFMSFLIAVPTGVKFFNWTGTMLKGSLSFETPMLWATGFLVSFLFGGLTGVILASPPMDFHVTDSYFVVAHFHYVVFGTV
VFATFAGFSFWWPKFTGKMLDERLGKIHFWTLFVGFHTTFLVQHWLGAEGMPRRYADYLAADGFTALNTVSSIGAFLLGL
STLPFLYNVWRTSRYGVRVDVDDPWGYGRSLEWATSCPPPRHNFVTLPRVRSEAPAFDLHHPRFAAITPPQTRSGQERTP
HPRFGQERPTDGPGGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 2e-146 63