Gene Information

Name : SCAB_71661 (SCAB_71661)
Accession : YP_003492696.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system transmembrane component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 7927955 - 7928998 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence :
GTGTTGGTCGACAGTCCTCCTGAACCGAGCGCGGAGACCGCCCCCGCGCCATCGAACCGCCGGGCGGTCCGCGTCGTCGG
GCTCCTCGTGTCCCTCCTGATCCTCGTCGCGGTCGCCCTGGCGAGTATCGCGATCGGTGCCAAGGAGCTGTCCCTCGGGC
AGGTCTGGCACGGGTTGTCCGCGGACACGGGGACGTACGGGGACGCCGTCGTCGGGGAACGGATCTCGCGCACCCTGCTC
GGACTCCTCGCGGGCGCCGCGCTGGGGCTCGCGGGGGCCGTCCTCCAGGCGCTCACCCGCAACCCGCTGGCCGACCCGGG
ACTGCTCGGCATCAACGCGGGCGCCTCCGCCGCGGTCGTCACCGCCCTCACCTACTTCGGCGTCACCTCGCTGAGCGGGT
ACGTGTGGTTCGCGTTCGCCGGTGCCGCCGCCGTCGGGGCGCTGGTCTGGTTCCTCGGCGGCAGCCGCGGCGCGACACCC
GTACGGCTCGCGCTCGCCGGCACGGCCGTCAGCGCCGCCCTCTACGGCTATCTGCAGGCCGTGATGATCATGGACGGCGC
GGCGCTCTCCAAGATGCGGTTCTGGACGGTCGGTTCGCTCGCGTCGGCGACCGACGAGACGATCACGCAGGTGCTGCCGT
TCCTGGCCGTCGGCACGGCCGTCGCCCTGCTGCTCGCCCGGCCGCTGAACGCGGTGGCCATGGGCGACGACACCGCTCGC
GCGCTCGGCGCCGACCTCAACCGCACCCGGGTGCTCTCCATGGCCGCCGCCACCGTGCTGTGTGGCGCCGCGACCGCCGC
CTGCGGGCCGATCGTGTTCGTCGGGCTGATGGTCCCGCACGCCGTGCGCTCCTTCACCGGACCCGACCTGCGCTGGATCC
TGCCGTACGCGACCGTCCTGTCACCCGTGCTGCTCCTCGGCGCCGACGTCGTCGGCCGCATGGTGGTCCGGCCCGCGGAG
CTGCAGGTCGGCATCGTCACCGCGATCCTCGGCGGACCGGTCTTCATCTTTCTCGTACGACGGCGAAGGACGGCGCAGCT
GTGA

Protein sequence :
MLVDSPPEPSAETAPAPSNRRAVRVVGLLVSLLILVAVALASIAIGAKELSLGQVWHGLSADTGTYGDAVVGERISRTLL
GLLAGAALGLAGAVLQALTRNPLADPGLLGINAGASAAVVTALTYFGVTSLSGYVWFAFAGAAAVGALVWFLGGSRGATP
VRLALAGTAVSAALYGYLQAVMIMDGAALSKMRFWTVGSLASATDETITQVLPFLAVGTAVALLLARPLNAVAMGDDTAR
ALGADLNRTRVLSMAAATVLCGAATAACGPIVFVGLMVPHAVRSFTGPDLRWILPYATVLSPVLLLGADVVGRMVVRPAE
LQVGIVTAILGGPVFIFLVRRRRTAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-16 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-16 41
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-16 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_71661 YP_003492696.1 iron-siderophore uptake system transmembrane component VFG0926 Protein 7e-28 48