Gene Information

Name : SCAB_7211 (SCAB_7211)
Accession : YP_003486483.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Unknown
Product : cation transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : -
Position : 806549 - 808213 bp
Length : 1665 bp
Strand : -
Note : -

DNA sequence :
ATGGGTCCCGTACTAGCCGGCGTCCTTCAGCTGCTGGCCCTCATGACGGCTCTGGCACTCGCCCACGCCCCCCTCGGCAC
CTACATGGCCGGGGTGTACTCCTCCGACCGGCACTGGCGGGTCGAGAAGTGGGCCTACCGGTGCATCGGCGCCGACCCCG
ACACCGAGATGCGCTGGCCCGCGTACCTGCGCGGTGTCCTGGCCCTCTCCACGGTCGGCGTCCTCTTCCTCTATCTGCTG
CAGCGGCTGCAGGGTGTCCTGCCCGGCTCGCTGGGCTTCGACGCGGTCGGCCCGGCGCAGTCGTTCAACACGGCCGTGTC
CTTCGTGACGAACACCGACTGGCAGTCGTACTACGGCGAGCAGACCATGGGCCATGTCGTCCAGACGGCCGGTCTCGCCG
TGCAGAACTTCGTCTCGGCGGCCGTCGGCATCGCCGTAGCCGTGGCGCTCGTGCGGGGCTTCGCCCGCTCGCGCACCGGC
GACCTCGGCAACTTCTGGGCCGACCTCATCCGCGGCACGTTCAGGATTCTCGTGCCGGGCGCGGCGATCGCGGCGGTCGT
CCTGGTGGCCTGCGGCGCGATCCAGAACTTCTCCGGCATCCACGAGGTCGGTCAGTTCATGGGCGGCTCGCAGCAATGGA
ACGGCGGCGCGGTCGCCTCCCAGGAGGCCATCAAGGAACTGGGCACCAACGGCGGCGGCTACTTCAACGCCAACTCCGCC
CACCCGTTCGAGAATCCGACGCCCTTCACCAACCTCTTCGAGATCTTCCTGCTGCTGGTGATCCCGTTCTCCCTGACCCG
GACCTTCGGGGTCATGGTCGGCTCGGTCAAGCAGGGCTACGCGATCCTGGCGGCCATGGCCATTATCTGGGTCGGCTTCG
TCGCCCTGATGATGTGGACCGAGTTCGCCCACCACGGACCGGCGCTGCAGATCGCCGGCGGTGCCATGGAGGGCAAGGAG
CTGCGGTTCGGGGTCGGTTCCTCGTCGATCTTCGCGGTGTCCACGACCCTGACGTCGACCGGCGCGGTGGACTCCTTCCA
CTCGTCCTTCACCGGCCTGGGCGGCGGTGTCACCATGCTCGGCATGATGCTGGGCGAGATCGCGCCCGGTGGCACCGGCT
CCGGCCTCTACGGCATGCTGATCATGGCGGTCGTCGCGGTGTTCATCGCCGGTCTGATGGTCGGCCGGACGCCCGAGTAC
CTGGGCAGGAAGATCGGCACCCGCGAGATCAAGCTCGCGGCCTGCTACATCCTGATCACCCCGGCGCTGGTGCTCGTCCT
CACGGCGGTCTCCCTGGCGCTGCCGACCCCGCCGCACTCGATGCTCAACTCCGGCGCGCACGGATTCTCCGAAGTGCTCT
ACGCCTTCACCTCCGCGGCCAACAACAACGGCTCGGCCTTCGCCGGCCTGAACGCGAACACCGACTGGTTCAACACCATG
ACCGCGATCGCGATGCTGCTCGGCCGCTTCCTGCCCATGGTCTTCGTCCTGGCCCTGGCCGGTTCGCTCGCCGGGCAGCA
GCCGGTGCCGGAGACCGCCGGCACCCTGCGCACCGAGAAGCCGCTGTTCACCGGGTTGCTGGTGGGCGCGATCCTCATCG
TCACCGGTCTGACGTATTTCCCCGCGCTCGCGCTGGGGCCGCTGGCCGAGGGGCTGGCGTCATGA

Protein sequence :
MGPVLAGVLQLLALMTALALAHAPLGTYMAGVYSSDRHWRVEKWAYRCIGADPDTEMRWPAYLRGVLALSTVGVLFLYLL
QRLQGVLPGSLGFDAVGPAQSFNTAVSFVTNTDWQSYYGEQTMGHVVQTAGLAVQNFVSAAVGIAVAVALVRGFARSRTG
DLGNFWADLIRGTFRILVPGAAIAAVVLVACGAIQNFSGIHEVGQFMGGSQQWNGGAVASQEAIKELGTNGGGYFNANSA
HPFENPTPFTNLFEIFLLLVIPFSLTRTFGVMVGSVKQGYAILAAMAIIWVGFVALMMWTEFAHHGPALQIAGGAMEGKE
LRFGVGSSSIFAVSTTLTSTGAVDSFHSSFTGLGGGVTMLGMMLGEIAPGGTGSGLYGMLIMAVVAVFIAGLMVGRTPEY
LGRKIGTREIKLAACYILITPALVLVLTAVSLALPTPPHSMLNSGAHGFSEVLYAFTSAANNNGSAFAGLNANTDWFNTM
TAIAMLLGRFLPMVFVLALAGSLAGQQPVPETAGTLRTEKPLFTGLLVGAILIVTGLTYFPALALGPLAEGLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 2e-58 43
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 3e-58 43
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 1e-35 41
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-35 41
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-35 41
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-35 41
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-35 41