Gene Information

Name : glnA (SCAB_66881)
Accession : YP_003492227.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 7401303 - 7402712 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGTTCCAGAACGCCGACGAGGCCAAGAAGTTCATCGCGGACGAGGACGTCAAGTTCGTCGACGTCCGCTTCTGCGACCT
GCCGGGCGTGATGCAGCACTTCACGATCCCGGCCGAGGCCTTCGACCCGGCCGAGGAGCTCGCGTTCGACGGCTCCTCGA
TCCGCGGCTTCCAGGCCATCCACGAGTCCGACATGGCGCTCCGCGCCGACCTGTCCACCGCGCGCGTCGACCCGTTCCGC
CGCGACAAGACGGTCAACATCAACTTCTTCATCCACGACCCGATCACGGGCGAGCAGTACTCCCGTGACCCGCGGAACGT
GGCGAAGAAGGCCGAGGCGTACCTCGCGTCCACCGGCATCGCCGACACCGCGTACTTCGGCCCCGAAGCCGAGTTCTACG
TTTTCGACAGCGTGCGCTTCAAGACCTCGGAGAACGAGTCCTTCTACCACATCGACTCCGAGGCGGGCGCCTGGAACACC
GGTGCGCTGGAGGACAACCGCGGTTACAAGGTCCGCTACAAGGGCGGGTACTTCCCGACCCCGCCGGTCGACCACTTCGC
CGACCTGCGTGCGGAGATCTCGCTGGAGCTGGCCAAGTCCGGCCTCCAGGTCGAGCGCCAGCACCACGAGGTGGGCACCG
CCGGCCAGGCCGAGATCAACTACAAGTTCAACACGCTGCTCGCCGCGGCCGACGACCTGCAGCTCTTCAAGTACATCGTG
AAGAACGTGGCCTGGCGCAACGGCAAGACCGCGACCTTCATGCCGAAGCCGATCTTCGGCGACAACGGCTCGGGCATGCA
CGTCCACCAGTCGCTGTGGGCGGGCGGCTCGCCGCTCTTCTACGACGAGGCCGGGTACGCGGGCCTGTCGGACATGGCGC
GCTACTACATCGGCGGCATCCTCAAGCACGCCCCGTCGCTGCTGGCCTTCACGAACCCGACGGTGAACTCGTACCACCGC
CTGGTCCCCGGCTTCGAGGCCCCGGTCAACCTGGTCTACTCGCAGCGCAACCGCTCCGCCGCCATGCGTATCCCGATCAC
GGGTTCGAACCCGAAGGCCAAGCGCGTCGAGTTCCGCGCGCCCGACTCCTCCGGCAACCCGTACCTCGCCTTCTCGGCCC
TGCTCCTCGCGGGCCTGGACGGCGTCAAGAACAAGATCGAGCCGGCCGAGCCGATCGACAAGGACCTCTACGAGCTGGCT
CCCGAGGAGCACGCGGGCGTCCCCCAGGTCCCGACCTCCCTCCCGGCCGTCCTCGACTCGCTGGAGCGCGACCACGAGTT
CCTCCTCCAGGGCGACGTCTTCACGCCGGACCTGATCGAGACGTGGATCGACTACAAGCGCGCCAACGAGATCGCCCCGC
TGCAGCTGCGCCCGCACCCGCACGAGTTCGAGCTGTACTTCGACGTGTGA

Protein sequence :
MFQNADEAKKFIADEDVKFVDVRFCDLPGVMQHFTIPAEAFDPAEELAFDGSSIRGFQAIHESDMALRADLSTARVDPFR
RDKTVNINFFIHDPITGEQYSRDPRNVAKKAEAYLASTGIADTAYFGPEAEFYVFDSVRFKTSENESFYHIDSEAGAWNT
GALEDNRGYKVRYKGGYFPTPPVDHFADLRAEISLELAKSGLQVERQHHEVGTAGQAEINYKFNTLLAAADDLQLFKYIV
KNVAWRNGKTATFMPKPIFGDNGSGMHVHQSLWAGGSPLFYDEAGYAGLSDMARYYIGGILKHAPSLLAFTNPTVNSYHR
LVPGFEAPVNLVYSQRNRSAAMRIPITGSNPKAKRVEFRAPDSSGNPYLAFSALLLAGLDGVKNKIEPAEPIDKDLYELA
PEEHAGVPQVPTSLPAVLDSLERDHEFLLQGDVFTPDLIETWIDYKRANEIAPLQLRPHPHEFELYFDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-88 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003492227.1 glutamine synthetase VFG1399 Protein 3e-165 71