|
Name : leuS (SCAB_60361) Accession : YP_003491595.1 Strain : Streptomyces scabiei 87.22 Genome accession: NC_013929 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : - Position : 6727458 - 6730340 bp Length : 2883 bp Strand : + Note : - DNA sequence : TTGAGGATCATGAGCGAGACGAACCCCGCCGCCGCTGACGTGGCGGCGGACGCCAGCCCCCACCGCTACACGGCCACCGT CGCGGCCGACATCGAGGCACGCTGGCAGGACTTCTGGGACGCCGAGGGCACCTACGCCGCACCCAACCCCACGGGTGACC TGGCGGGCGACGCCGAGCTGGCCGCCAAGCCCAAGAAGTTCATCATGGACATGTTCCCGTACCCCTCCGGAGCGGGACTG CACGTCGGCCACCCCCTGGGCTACATCGCCACCGACGTCTCCGCCCGCTTCCAGCGGATGACCGGCCACAACGTCCTGCA CACCCTGGGCTTCGACGCCTTCGGCCTGCCCGCCGAACAGCACGCCGTCGCCACCGGCGAGCACCCCCGCGTCACCACCG AAGCGGCCATCAACAACATGAAGTCCCAGCTGCGCCGGCTGGGACTGGGCCACGACAAGCGCCGGTCGTTCGCCACGATC GACCAGGACTACTACAAGTGGACCCAGTGGATCTTCCTGCAGATCTTCAACTCCTGGTACGACGACGAGACCGGACGGGC CCGCCCTATCGCCGAACTGGTCGCCCAGTTCGAGTCCGGTGAGCGCGCGCTGCCCGGCGGCGGTTCCTGGAGCGCGCTGA GCGCCACCGAACGCGCCGACGTCCTGGGCGAGTACCGACTGGCGTACGCCTCCGACGCTCCCGTCAACTGGTGCCCCGGC CTGGGCACCGTGCTGGCCAACGAGGAGGTCACCGCCGACGGCCGCTCCGAGCGCGGCAACTTCCCCGTCTTCAAGGCCAA GCTGCGCCAGTGGAACATGCGCATCACCGCCTACGCCGACCGTCTGCTGGACGACCTGAACGAGCTGGACTGGCCCGAGG CCATCAAGCTGCAGCAGCGCAACTGGATCGGCCGCTCCGAGGGCGCCCGCGTCGACTTCCCCGTCGACGGGGAGCACATC ACGGTCTTCACCACCCGCCCCGACACCCTGTTCGGCGCGACCTACATGGTCCTGGCCCCCGAGCATCCGCTGGTCGACAA GTTCACCCCGGACGCCTGGCCCGAGGGCACCCACGACGTGTGGACCGGCGGTCACGCGACCCCCGCCGAGGCCGTCGCCG CCTACCGCGCGCAGGCCGCCTCGAAGTCCGACGTCGAGCGGCAGGCCGAGGCCAAGGACAAGACCGGCGTCTTCACCGGC TCGTACGCGACCAACCCCGTCAACGGCGAGCGCGTCCCGGTCTTCATCGCCGACTACGTCCTGATGGGCTACGGCACCGG CGCGATCATGGCCGTCCCGGCCGGCGACCAGCGCGACTTCGAGTTCGCGCGCGCCTTCGAACTGCCCGTCGTCTGCATCG TCGAGCCGACCGACGGCCGCGGCACGGACACCTCCACCTGGGAGGACGCCTTCGCCTCGTATGACGCGAAGATCATCAAC TCCACCGGTGAGGGCGTGTCCCTGGACGGCCTGGGCGTCGTCGAGGCCAAGGCACGCATCACGGAATGGCTGGAGCGGAC CGGCATCGGTCAGGGCACCGTCAACTTCCGCCTGCGCGACTGGCTGTTCAGCCGCCAGCGCTACTGGGGCGAGCCCTTCC CGATCGTCTACGACGAGGACGGCGTCGCGCACCCGCTGCCCGAGTCGATGCTGCCGCTGGAACTGCCCGAGGTCGAGGAC TACTCGCCGCGCACCTTCGAGCCGGACGACGCCGACACCCGGCCCGAGACGCCGCTGTCGCGCAACGAGGACTGGGTGAA CGTCACGCTGGACCTGGGCGACGGCCCCAAGCGCTATCGGCGTGAGACCAACACCATGCCCAACTGGGCCGGTTCCTGCT GGTACGAGCTGCGCTACCTGGACCCGCACAACTCCGAGAAGCTGGTCGACCCCGAGATCGAGCGGTACTGGATGGGCCCG CGCGAGGGACAGCCGCACGGCGGTGTCGACCTGTACGTCGGCGGCGCCGAGCACGCGGTGCTGCACCTGCTGTACGCGCG CTTCTGGTCCAAGGTCCTGTTCGACCTGGGGCACGTCTCCTCGGCCGAGCCGTTCCACAAGCTGTTCAACCAGGGCATGA TCCAGGCCTTCGTCTACCGCGACAGCCGCGGCTTCGCGGTGCCGGCCGCCGAGGTGGAGGAGCGCGACGGCGCCTACTTC CACCAGGGCGAGAAGGTCAGCCGTCTGCTGGGCAAGATGGGCAAGTCCCTGAAGAACGCCGTCACGCCCGAGTCGATCTG CGAGGAGTACGGCGCGGACACACTGCGGCTGTACGAGATGGCGATGGGCCCCCTGGACGTCTCCCGGCCGTGGGACACGC GCGCGGTGGTGGGCCAGTACCGGCTGCTGCAGCGGCTGTGGCGCAACGTCGTCGACGAGACCACCGGCGAGGTGACCGTC GTGGACACCGAGCCCGGCGAGGACACCCTGCGCGCACTGCACAAGGCCATCGACGGCGTACGGCAGGACCTGGAGGGCAT GCGGTTCAACACCGCGATCGCCAAGGTCACCGAGCTGAACAACCACCTGACCAAGGCGGGCGGCCCGGTGTCCCGCCCCG TCGCCGAGGCCCTGGTCCTGCTGGTCGCTCCGCTGGCCCCGCACATCGCCGAGGAGCTGTGGCGCAGGCTGGGCCACACC GACTCGGTCGTCCACCAGGACTTCCCCGTCGCCGACCCCGCGTACGTCGTCGACGAGGCCGTCACCTGCGTCGTCCAGAT CAAGGGCAAGGTCAAGGCCCGTCTGGAGGTGTCGCCGGCCATCTCCGAGGACGAGCTGGAGAAGGTGGCCCTGGGCGACG AGAAGGTGGTCGCGGCGCTGGCCGGCGCACCGATCCGCAAGGTCATCGTGCGGGCGCCGAAGCTGGTGAACATCGTCACC TGA Protein sequence : MRIMSETNPAAADVAADASPHRYTATVAADIEARWQDFWDAEGTYAAPNPTGDLAGDAELAAKPKKFIMDMFPYPSGAGL HVGHPLGYIATDVSARFQRMTGHNVLHTLGFDAFGLPAEQHAVATGEHPRVTTEAAINNMKSQLRRLGLGHDKRRSFATI DQDYYKWTQWIFLQIFNSWYDDETGRARPIAELVAQFESGERALPGGGSWSALSATERADVLGEYRLAYASDAPVNWCPG LGTVLANEEVTADGRSERGNFPVFKAKLRQWNMRITAYADRLLDDLNELDWPEAIKLQQRNWIGRSEGARVDFPVDGEHI TVFTTRPDTLFGATYMVLAPEHPLVDKFTPDAWPEGTHDVWTGGHATPAEAVAAYRAQAASKSDVERQAEAKDKTGVFTG SYATNPVNGERVPVFIADYVLMGYGTGAIMAVPAGDQRDFEFARAFELPVVCIVEPTDGRGTDTSTWEDAFASYDAKIIN STGEGVSLDGLGVVEAKARITEWLERTGIGQGTVNFRLRDWLFSRQRYWGEPFPIVYDEDGVAHPLPESMLPLELPEVED YSPRTFEPDDADTRPETPLSRNEDWVNVTLDLGDGPKRYRRETNTMPNWAGSCWYELRYLDPHNSEKLVDPEIERYWMGP REGQPHGGVDLYVGGAEHAVLHLLYARFWSKVLFDLGHVSSAEPFHKLFNQGMIQAFVYRDSRGFAVPAAEVEERDGAYF HQGEKVSRLLGKMGKSLKNAVTPESICEEYGADTLRLYEMAMGPLDVSRPWDTRAVVGQYRLLQRLWRNVVDETTGEVTV VDTEPGEDTLRALHKAIDGVRQDLEGMRFNTAIAKVTELNNHLTKAGGPVSRPVAEALVLLVAPLAPHIAEELWRRLGHT DSVVHQDFPVADPAYVVDEAVTCVVQIKGKVKARLEVSPAISEDELEKVALGDEKVVAALAGAPIRKVIVRAPKLVNIVT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 2e-139 | 50 |
